DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb3b

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_941373.1 Gene:Serpinb3b / 383548 MGIID:2683293 Length:387 Species:Mus musculus


Alignment Length:384 Identity:137/384 - (35%)
Similarity:214/384 - (55%) Gaps:24/384 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVS---- 66
            :.|.....:|..|:::.|...  .:|:.:||.|:.|.:|:...|::|.|..:|.|.|.|:.    
Mouse     2 IRFHAADVKFAVEMYRQLRES--DKNIFYSPISMMTALAMLQLGAKGNTEIQIEKVLQFIETTKK 64

  Fly    67 --------NFPPEVAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAE 120
                    :....|.:.||.::.:...||   .|:.||.:|..:|......:...|||.|.::.|
Mouse    65 TTEKSEHCDDEENVHEQFQKLITQLNKSNDDYDLKAANSIYGAKGFPFLQTFLEDIKEYYQAKVE 129

  Fly   121 SINFA-LNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEE 184
            |::|. ..:.:.:.||:||.:||.|||.:|..:.|.|.:|.|||:||::|||.|..||:|..|.|
Mouse   130 SLDFEHATEESEKKINSWVESKTNGKIKDLFPSGSLSSSTILVLVNAVYFKGQWNRKFNENHTRE 194

  Fly   185 DIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLK 249
            :.||:.:.....:..|.|:.|||:.|..|:....:|:||:..|||||||||.|..|:..|.|:|.
Mouse   195 EKFWLNKNTSKPVQMMKQRNKFNFSFLGDVHAQIVEIPYKGKDLSMFVLLPMEIDGLKQLEEQLT 259

  Fly   250 TVNLVD--LADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQ-AEFSNLLESPEGVFV 311
            |..|::  .|:.:.:.|:::..|:|||:...:|...|:.:|:...|..| |:||.:...| |:.|
Mouse   260 TDKLLEWIKAENMHLTELYLSLPRFKVEEKYDLQVPLEHMGMVDAFDPQKADFSGMSSIP-GLVV 323

  Fly   312 SKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNK--KNILFAG 368
            ||||||:.:||||||||||||||:.:..|.......|..|.|||:.|.::  .:|||.|
Mouse   324 SKVLHKSFVEVNEEGTEAAAATGVEVSVRSAQIAEDFCCDHPFLFFIIHRMTNSILFFG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 136/377 (36%)
Serpinb3bNP_941373.1 SERPIN 6..387 CDD:294093 136/380 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2402
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 232 1.000 Inparanoid score I3415
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.780

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