DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb3c

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_958751.2 Gene:Serpinb3c / 381286 MGIID:1277952 Length:386 Species:Mus musculus


Alignment Length:386 Identity:137/386 - (35%)
Similarity:215/386 - (55%) Gaps:33/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE- 71
            |.....:||.|:::.|...  .:|:.:||.|:.|.:.:...|::|.|..:|.|.|.  .|...| 
Mouse     4 FPEADGKFTVEMYRQLRES--DKNIFYSPISMITALGMLKLGAKGNTEIQIEKVLQ--CNETTEK 64

  Fly    72 -------------VAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAE 120
                         |.:.||.::.:...||   .|:.||.:|..:|..|...:...|||.||:..|
Mouse    65 TTEKSAHCDDEDNVHEQFQKLITQLNKSNDDYDLKAANSIYGAKGFPLLQTFLEDIKEYYHANVE 129

  Fly   121 SINFALNDAAAQA---INAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERT 182
            |::|  ..||.::   ||.||..:|.|||.:|..:.|.|.:|:|||:||::|||.|.|||.|..|
Mouse   130 SLDF--EHAAEESEKKINFWVKNETNGKIKDLFPSGSLSSSTKLVLVNAVYFKGRWNHKFDENNT 192

  Fly   183 EEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEK 247
            .|::||:.:...:.:..|.|:.||.:.|.||:....:|:||:..:||||||||.|..|:..|.::
Mouse   193 IEEMFWLNKNTSIPVPMMKQRNKFMFSFLEDVQAQIVEIPYKGKELSMFVLLPMEIDGLKQLEKQ 257

  Fly   248 LKTVNLVD--LADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQ-AEFSNLLESPEGV 309
            |....|::  .|:.:.:.|:::..|:|||:...:|...|:.:|:...|..| |:||. :.|.:|:
Mouse   258 LTAAKLLEWTRAENMHLTELYLWLPRFKVEEKYDLPVPLECMGMVNAFDPQKADFSG-MSSTQGL 321

  Fly   310 FVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKK--NILFAG 368
            .|||||||:.:|||||||||..|:|..::.|:... ..|:.|.|||:.|.:.|  :|||.|
Mouse   322 VVSKVLHKSFVEVNEEGTEADPASGEEVILRLAQV-ADFRCDHPFLFFIIHSKTNSILFFG 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 135/377 (36%)
Serpinb3cNP_958751.2 serpin 1..386 CDD:476815 137/386 (35%)

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