DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb3c

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_958751.2 Gene:Serpinb3c / 381286 MGIID:1277952 Length:386 Species:Mus musculus


Alignment Length:386 Identity:137/386 - (35%)
Similarity:215/386 - (55%) Gaps:33/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE- 71
            |.....:||.|:::.|...  .:|:.:||.|:.|.:.:...|::|.|..:|.|.|.  .|...| 
Mouse     4 FPEADGKFTVEMYRQLRES--DKNIFYSPISMITALGMLKLGAKGNTEIQIEKVLQ--CNETTEK 64

  Fly    72 -------------VAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAE 120
                         |.:.||.::.:...||   .|:.||.:|..:|..|...:...|||.||:..|
Mouse    65 TTEKSAHCDDEDNVHEQFQKLITQLNKSNDDYDLKAANSIYGAKGFPLLQTFLEDIKEYYHANVE 129

  Fly   121 SINFALNDAAAQA---INAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERT 182
            |::|  ..||.::   ||.||..:|.|||.:|..:.|.|.:|:|||:||::|||.|.|||.|..|
Mouse   130 SLDF--EHAAEESEKKINFWVKNETNGKIKDLFPSGSLSSSTKLVLVNAVYFKGRWNHKFDENNT 192

  Fly   183 EEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEK 247
            .|::||:.:...:.:..|.|:.||.:.|.||:....:|:||:..:||||||||.|..|:..|.::
Mouse   193 IEEMFWLNKNTSIPVPMMKQRNKFMFSFLEDVQAQIVEIPYKGKELSMFVLLPMEIDGLKQLEKQ 257

  Fly   248 LKTVNLVD--LADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQ-AEFSNLLESPEGV 309
            |....|::  .|:.:.:.|:::..|:|||:...:|...|:.:|:...|..| |:||. :.|.:|:
Mouse   258 LTAAKLLEWTRAENMHLTELYLWLPRFKVEEKYDLPVPLECMGMVNAFDPQKADFSG-MSSTQGL 321

  Fly   310 FVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKK--NILFAG 368
            .|||||||:.:|||||||||..|:|..::.|:... ..|:.|.|||:.|.:.|  :|||.|
Mouse   322 VVSKVLHKSFVEVNEEGTEADPASGEEVILRLAQV-ADFRCDHPFLFFIIHSKTNSILFFG 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 136/381 (36%)
Serpinb3cNP_958751.2 SERPIN 6..386 CDD:294093 136/384 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.730

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