DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina11

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001008776.1 Gene:Serpina11 / 362774 RGDID:1359239 Length:462 Species:Rattus norvegicus


Alignment Length:425 Identity:115/425 - (27%)
Similarity:195/425 - (45%) Gaps:86/425 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPP--EVAQTFQ 77
            |...|::.| |..:..|::|||.|:.:.:||...|:..:|..:|.::|.|.....|  ::.:.||
  Rat    57 FALRLYKQL-AEEIPGNILFSPVSLSSTVALLSLGAHADTQAQILQSLGFNLTETPAADIHRGFQ 120

  Fly    78 FVLE-------KYRNSNLLRVANKLYVQEGKQLKP--AYQSAIKEQYHSEAESINFALNDAAAQA 133
            .:|.       |..    |::.:.|::.  :||||  .:..:.||.|.:.|.|.||....|..|.
  Rat   121 SLLHTLDLPSPKLE----LKLGHSLFLD--RQLKPQQRFLDSAKELYGALAFSANFTEAAATGQQ 179

  Fly   134 INAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERT-EEDIFWVGEEEQVKI 197
            ||..|..:|.|::...:  ..|..:|.:||||.:.||..|.|.|...:| :::.|:|.:..|::|
  Rat   180 INDLVRKQTYGQVVGCL--PEFDRDTLMVLLNYIFFKAKWKHPFDRYQTRKQESFFVDQRLQLRI 242

  Fly   198 NYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVL----------------------------- 233
            ..|.||....:.:.::..||.|::.|..:.|.:.||                             
  Rat   243 PMMRQKEMHRFLYDQEASCTVLQIEYSGTALLLLVLPDPGKMQQVEAALQPETLRRWGQRFLPRK 307

  Fly   234 ------------------LPQERTGIYAL--AEKLKTVNLVDLADKLTVEEVHVKFPKFKVDYSL 278
                              .||.|.|..:|  .:..:|.:|:||         |:  |:|.|..:.
  Rat   308 AQAGGAGNGGLHWDRVNEFPQNRVGKLSLKHLQMTQTWSLLDL---------HL--PRFSVSATY 361

  Fly   279 ELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMM--TRM 341
            .|.|.|..:|::.:|..:|:.|.::...... ||:|.|||.:::||:|||||||:|::..  :..
  Rat   362 NLEEILPLVGLSSLFDVEADLSGIMGQLNKT-VSRVSHKAVVDMNEKGTEAAAASGLLSQPPSLN 425

  Fly   342 MTFPLQFQADRPFLYVIW--NKKNILFAGAFVKAA 374
            ||.......:||||.::|  ..:::||.|..|..|
  Rat   426 MTSAPHAHFNRPFLLLLWEVTTQSLLFLGKVVNPA 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 112/417 (27%)
Serpina11NP_001008776.1 serpinA11 50..462 CDD:381025 115/425 (27%)

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