DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn47C

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster


Alignment Length:369 Identity:107/369 - (28%)
Similarity:203/369 - (55%) Gaps:16/369 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEI-AKALHFVSNFPPEVAQTFQF 78
            |...||:.|:......|::.||...::.:.|.|.|:.|::|||: :|.:..||| ..|||:..  
  Fly    18 FARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSN-KSEVAKQH-- 79

  Fly    79 VLEKY-------RNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINA 136
             .|.:       :....||:..:|||.|.::::..:.....|.:::||.|:|:...:.:.:.:|.
  Fly    80 -AESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSVKKVNK 143

  Fly   137 WVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMN 201
            |:...|...:..|.:.:.|:.::.::|:|:|.|:..|...|.::.|:.|.||:...::::::.|.
  Fly   144 WLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVSMMR 208

  Fly   202 QKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVH 266
            |..:|.||..:.|....|::|::.|:|:|.::||....|:..|.|||..:::.::|.|..::||.
  Fly   209 QIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSLMKEVD 273

  Fly   267 VKFPKFKVDYSLELAEKLKQLGITKMF-TDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAA 330
            |..|||:::.:::|...|:::||..:| ..||:.|:|.|......:|:..||..:.|.|.|.| .
  Fly   274 VTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARHKVFLNVTEFGCE-V 337

  Fly   331 AATGMIMMTRMMTFPLQ--FQADRPFLYVIWNKKNILFAGAFVK 372
            |....:....:...|.:  |:|||||::.|.::||:.|.|.|||
  Fly   338 APEAEVQPEVLKKNPDRKFFKADRPFVFAIRDRKNVYFVGHFVK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 104/365 (28%)
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 104/365 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449403
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
76.850

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