DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn43Ad

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster


Alignment Length:388 Identity:102/388 - (26%)
Similarity:175/388 - (45%) Gaps:46/388 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RGGARFTSELFQLLSAGGLKE---NVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE 71
            |.|.|.|::|       ||.:   |||.||..||..::|.:|.|..|...::.:||.......|:
  Fly    38 RFGLRLTTKL-------GLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHPK 95

  Fly    72 VA-QTFQFVLEKYRNSNL----LRVANKLYVQEGKQLKPAYQSAIKEQYHSEA-------ESINF 124
            :| |.|:.:|...:.|..    ||:.:.||.|:      .:....:.::.:.|       ..:::
  Fly    96 LAVQDFETLLTDLKQSAAIGCRLRLLSDLYAQQ------RFTFNFRNEFETLAARMGVGCHRLSW 154

  Fly   125 ALNDAAAQAINAWVNAKTQGKITELVSA---DSFSD-NTRLVLLNALHFKGSWAHKFSEERTEED 185
            .....|||.||....:::...:.|||||   :|.:: ||..:.::.:.|:..||..|....|:..
  Fly   155 ESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSI 219

  Fly   186 IFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKT 250
            .|:.|......::.|..:.::.|.....|....:|:|:..:||.|.::.|....|:..|..||..
  Fly   220 NFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQ 284

  Fly   251 VNLVDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAE----FSNLLES---PEG 308
            .:|..|..:|...:|.:..||.:|....:|...|::||:.|:||.:..    ||::|.|   |.|
  Fly   285 SDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLG 349

  Fly   309 VFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKKNILFAGAFV 371
            .    |:....:|:.|:|..|..:.....:.| ...||..  :.||.|.|.|.|.:|.:|..|
  Fly   350 A----VVQSGLLELQEDGGNADDSFSFGDLFR-RALPLVI--NHPFFYAIGNGKTLLLSGHIV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 99/382 (26%)
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 101/385 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449388
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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