DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn42De

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster


Alignment Length:369 Identity:123/369 - (33%)
Similarity:207/369 - (56%) Gaps:11/369 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQT 75
            |.|:|.|:||..|:......|:||||.||:|.:|||:.|::|.||||:...|........|||:.
  Fly    31 GEAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEK 95

  Fly    76 FQFVLEKYR--------NSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQ 132
            ...:|.|.:        :...|:.||:::|.:..:|...||..:.:.:.:.||::||......|:
  Fly    96 LDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAK 160

  Fly   133 AINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKI 197
            .||:||..:|..:|.:|::.:|...:|..:|:||::||..|...|.:..|....|......:|.:
  Fly   161 HINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSV 225

  Fly   198 NYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTV 262
            :.|:|:..|.:|...:|....:|:||..:|:...::||||..|:..:.|||..::|.:::.:|..
  Fly   226 DTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQLRR 290

  Fly   263 EEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGT 327
            .:|.|:.||||.::.:.|...|::|||.|:|:..|..|:|.:..|.:.:|:|.|||.|||||:||
  Fly   291 RKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEKGT 355

  Fly   328 EAAAATGMIMMTRMMTF---PLQFQADRPFLYVIWNKKNILFAG 368
            .|:.||.:.:....:|.   ..:|.||.||.:.|.:.:|.||.|
  Fly   356 TASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNTLFLG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 122/367 (33%)
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 123/369 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446422
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm8430
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
1110.800

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