DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and Spn28Da

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:371 Identity:111/371 - (29%)
Similarity:196/371 - (52%) Gaps:29/371 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE---VAQT 75
            :||.:|::.......:.|::.||..::..:::...|:.|.||:|:..||    |.|.:   ||..
  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL----NLPEDKKNVATI 76

  Fly    76 FQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAW 137
            :..:|.|.....   :|.:||:|:|.|...:...|...:.:.:.:|||:|..|....||.|||.|
  Fly    77 YDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDW 141

  Fly   138 VNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQ 202
            |..:|...:.:::.....:.:...|::||..|||.|..:|.:..|:..:|:|.:..||.:|.|:|
  Fly   142 VLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQ 206

  Fly   203 KAKFNY--GFFEDLGCTALEMPYQDSDLSMFVLLPQER---TGIYALAEKLKTVNLVDLADKLTV 262
            ..:|..  ...:.:    :|:|:..|:|||.::||::.   |...|..|....:.|.::      
  Fly   207 VGRFKMRTSTIDQI----IELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTEM------ 261

  Fly   263 EEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGT 327
             :|||:.||||:|:.:||.|.||.:||..:|...::.|.|| :..|..:|:|:|||.||::|||.
  Fly   262 -DVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLL-NQSGTRISQVVHKAFIEIDEEGG 324

  Fly   328 EA--AAATGMIMMTRMMTFPLQFQADRPFLYVIWNKKNILFAGAFV 371
            .|  |:|:.:..::...|..:.|..:.||:::|.:..||.|.|..|
  Fly   325 SAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVV 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 109/365 (30%)
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 111/371 (30%)

Return to query results.
Submit another query.