DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb1b

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:378 Identity:133/378 - (35%)
Similarity:217/378 - (57%) Gaps:21/378 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETAD---EIAKALHFVSNF 68
            :.:...:.|..|||..||......| :||||||.:.:|:.|.|::|.:|.   .:|:..||.|  
  Rat     3 QLSSANSLFALELFHTLSESSPTGN-IFSPFSISSALAMVFLGAKGSSAPSSLRLAETFHFDS-- 64

  Fly    69 PPEVAQTFQFV---LEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFA-LNDA 129
            ..::...||.:   :.|:..|:.|:|||:||.::.....|.:.::.::.|.::...::|. .::.
  Rat    65 VEDIHSRFQSLNAEMRKHGASHTLKVANRLYGEKTYNFLPEFLASTQKMYGADLAPVDFQHASED 129

  Fly   130 AAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQ 194
            |.:.||.||..:|:|||.||::....:..|:|||:||::|||.|..||....|.:..|.:.:::.
  Rat   130 ARKEINKWVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTDAPFRLNKKDT 194

  Fly   195 VKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQ----ERTGIYALAEKLKTVNLVD 255
            ..:..|.||.||.:|:..||.|..||||||..:|||.:|||:    |.||:..:.|:|....|.:
  Rat   195 KMVKMMYQKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLQKIEEQLTLEKLYE 259

  Fly   256 LA--DKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMF-TDQAEFSNLLESPEGVFVSKVLHK 317
            ..  :.|...:|||..||||::.|..|...|.:||:..:| :.:|:.|.:.||.: :|:||::||
  Rat   260 WTKHENLKEIDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMSESRD-IFISKIVHK 323

  Fly   318 ATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNK--KNILFAG 368
            :.:|||||||||||||..::...:::.. .|..|.|||:.|.:.  .|:||.|
  Rat   324 SFVEVNEEGTEAAAATAGLVEYCLVSIE-AFIVDHPFLFFIRHNPTANMLFFG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 133/372 (36%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 133/378 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2400
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3374
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.980

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