DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb9d

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001100821.1 Gene:Serpinb9d / 306890 RGDID:1308725 Length:337 Species:Rattus norvegicus


Alignment Length:345 Identity:118/345 - (34%)
Similarity:193/345 - (55%) Gaps:30/345 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LAFAGSQGETADEIAKALHFVSNFPPEVAQTFQFV---LEKYRNSNLLRVANKLYVQEGKQLKPA 106
            :...|::|:||.:|::||:...:...::.:.||.:   |.|.::...||:||:|:.:...:|.|.
  Rat     1 MVLLGAKGDTAVQISQALNLNKHPDEDIHKDFQLLLHNLNKPKSHYCLRIANRLFAENTCKLVPT 65

  Fly   107 YQSAIKEQYHSEAESINFALNDAAAQA---INAWVNAKTQGKITELVSADSFSDNTRLVLLNALH 168
            |:.:....|:||.|.::||  .||.::   ||.||:.:|:|||.||:|:||....|:|:::|||:
  Rat    66 YKESCLRFYNSEIEQLSFA--KAAEESRKHINTWVSKQTEGKIPELLSSDSVGSETKLIMVNALY 128

  Fly   169 FKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVL 233
            |:|||.|.|.:|.|.|..|.:.::|...:..|.|:..|:..:.:::....|.|||:..::|..||
  Rat   129 FQGSWLHCFDKEFTMEMPFKINKKETKPVQMMWQEETFDVAYVKEIQAQILVMPYRGMEMSFMVL 193

  Fly   234 LPQERTGIYALAEKLKTVNLVDLADKLTV---------EEVHVKFPKFKVDYSLELAEKLKQLGI 289
            ||.|...|..:...|       ..:|||.         .||:|..|||::....::....:.||:
  Rat   194 LPDEGVDIRKVESSL-------TFEKLTAWTKPEFIYSTEVYVYLPKFQLQEQYDMTALFQHLGM 251

  Fly   290 TKMFTD-QAEFSNLLESPE-GVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADR 352
            ..:|:: :|:.|.:  .|| .:.|||.:|:..:||||||||||||:..........:...|.|||
  Rat   252 IDVFSEIKADLSGM--CPEKDLCVSKFVHECVVEVNEEGTEAAAASAADCCYSCSEYTPTFCADR 314

  Fly   353 PFLYVI-WNKKN-ILFAGAF 370
            |||:.| .|:.| |||.|.|
  Rat   315 PFLFFIRHNQTNSILFCGRF 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 117/343 (34%)
Serpinb9dNP_001100821.1 SERPIN 1..337 CDD:294093 118/345 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2400
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3374
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.880

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