DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb12

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_038946584.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:423 Species:Rattus norvegicus


Alignment Length:411 Identity:121/411 - (29%)
Similarity:206/411 - (50%) Gaps:58/411 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE------- 71
            :|..:.||.:|.....:|:...|.|:.....:...|::|::|.:|.:.||| :..|.:       
  Rat    10 KFCFDFFQEISKDDAHKNIFVCPLSLSAAFGMVRLGARGDSAQQIDEVLHF-NELPKDERKEPSE 73

  Fly    72 ------------------VAQTFQFVLEKYRNSN---------------------LLRVANKLYV 97
                              .|...|.|..:..|.:                     .|.:||:||.
  Rat    74 PSSKSKASDSSLEGQKQTTASQGQQVSGESTNEHRLLGCHFGKLLSRIDRDKAHYTLSMANRLYG 138

  Fly    98 QEGKQLKPAYQSAIKEQYHSEAESINFALN-DAAAQAINAWVNAKTQGKITELVSADSFSDNTRL 161
            ::...:.|.|...|.|.||:..||::|..: :.:.:.||.||.:::||||.||...::..::|.|
  Rat   139 EQEFPICPEYSDDITEFYHTTIESVDFQKDTEKSREEINFWVESQSQGKIKELFDKEAIDNSTVL 203

  Fly   162 VLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDS 226
            ||:||::||..|..:|..|.|.:..|.:.|.|:..:..||||.:|..||.|:|....|||.|...
  Rat   204 VLVNAVYFKAKWEKEFDSENTVDAPFCLSENEKKTVKMMNQKGQFRIGFIEELQAQILEMKYTTG 268

  Fly   227 DLSMFVLLP-QERTGIYALAEKLKTVNLVDL-----ADKLTVEEVHVKFPKFKVDYSLELAEKLK 285
            .|||.|||| .....:.:|.|..|.:|...|     .:.::.:.|.:.||:|.::.|.:|...|:
  Rat   269 KLSMLVLLPSSSEDNVKSLQELEKKINHEKLLAWSNPENMSEKPVAISFPQFIMEDSYDLNSVLQ 333

  Fly   286 QLGITKMFT-DQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQ 349
            .:||..:|. .:|:.:.:.:|| .:.:|||:||..:||:|.||:||||:|.::..:.:...::|.
  Rat   334 DMGIRDVFDGTKADLTGISKSP-SLHLSKVVHKTFVEVDEMGTQAAAASGAVVAEKALPSRVEFN 397

  Fly   350 ADRPFLYVIWNK--KNILFAG 368
            |:||||:.|.:.  :::||.|
  Rat   398 ANRPFLFFIRHNGTQSLLFCG 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 121/411 (29%)
Serpinb12XP_038946584.1 serpinB12_yukopin 1..423 CDD:381037 121/411 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2400
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3374
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.880

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