DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and LOC299282

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001376144.2 Gene:LOC299282 / 299282 RGDID:3745 Length:413 Species:Rattus norvegicus


Alignment Length:373 Identity:116/373 - (31%)
Similarity:196/373 - (52%) Gaps:20/373 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NLEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF--VSN 67
            :|..|.....|...|::.|:.....:||||||.||...:.:...|::..|.:||.:.|.|  ...
  Rat    42 SLTLASSNTDFALSLYKKLALRNPDKNVVFSPLSISAALTILSLGAKDSTMEEILEGLKFNLTEI 106

  Fly    68 FPPEVAQTFQFVLEKY---RNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDA 129
            ...|:.|.|..:|::.   .:...:...:.|::.:.:.:...:|...:..|.:||...:|...:.
  Rat   107 TEEEIHQGFGHLLQRLSQPEDQVEINTGSALFIDKEQPILSEFQEKTRALYQAEAFIADFKQPNE 171

  Fly   130 AAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQ 194
            |.:.||.:|:.:|||||.||.|  ...:.|.:||:|.|.|||.|...|:...|.|..|::.|:..
  Rat   172 AKKLINDYVSNQTQGKIAELFS--DLEERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRS 234

  Fly   195 VKINYMN-QKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLAD 258
            ||:..|. ::....|...|:|.|:.||:.|..:..::|:|..|.:  :..:...|:...|....|
  Rat   235 VKVPMMKIKEVTTPYVRDEELSCSVLELKYTGNASALFILPDQGK--MQQVESSLQPETLKKWKD 297

  Fly   259 KLTVEEVH-VKFPKFKV--DYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATI 320
            .|....:: ::.|||.:  ||||:  |.|.:|||.|:|:.||:.|.:..:.: ::||:|:|||.:
  Rat   298 SLIPRIINDLRMPKFSISTDYSLK--EVLPELGIKKVFSQQADLSRITGTKD-LYVSQVVHKAVL 359

  Fly   321 EVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVI--WNKKNILF 366
            :|:|.||||.||||:..:.|.....|.|  :|||:.||  .:.::|||
  Rat   360 DVDETGTEATAATGVATVIRRQPRTLNF--NRPFMVVITDMDSQSILF 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 114/365 (31%)
LOC299282NP_001376144.2 serpinA3_A1AC 36..413 CDD:381019 116/373 (31%)
RCL 365..389 11/25 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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