DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpine2

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_062070.1 Gene:Serpine2 / 29366 RGDID:3748 Length:397 Species:Rattus norvegicus


Alignment Length:347 Identity:111/347 - (31%)
Similarity:185/347 - (53%) Gaps:11/347 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQTFQFVLEKYRNSNLLRVANK 94
            ||||.||..|.:.:.:...|:.|.|..:::..:.:..|...:|.:.....:...:|.:::.|||.
  Rat    49 ENVVISPHGIASILGMLQLGADGRTKKQLSTVMRYNVNGVGKVLKKINKAIVSKKNKDIVTVANA 113

  Fly    95 LYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVNAKTQGKITELVSADSF-SDN 158
            ::|:.|.:::..:.:..||.:..|.:|:||....:|..|||.||..:|:|.|..|:|.:.. |..
  Rat   114 VFVRNGFKVEVPFAARNKEVFQCEVQSVNFQDPASACDAINFWVKNETRGMIDNLLSPNLIDSAL 178

  Fly   159 TRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFE---DLGCTALE 220
            |:|||:||::|||.|..:|..|.|::..|..|:.:..::..:.|.:.|..|..:   .|....:|
  Rat   179 TKLVLVNAVYFKGLWKSRFQPENTKKRTFVAGDGKSYQVPMLAQLSVFRSGSTKTPNGLWYNFIE 243

  Fly   221 MPYQDSDLSMFVLLPQE-RTGIYALAEKLKTVNLVDLADKLTVEEVHVKFPKFKVDYSLELAEKL 284
            :||....:||.:.||.| .|.:.|:...:.|..:....:.:..:.:.:..|||......:|.|.|
  Rat   244 LPYHGESISMLIALPTESSTPLSAIIPHISTKTINSWMNTMVPKRMQLVLPKFTAVAQTDLKEPL 308

  Fly   285 KQLGITKMF-TDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQF 348
            |.||||:|| ..:|.|:.:..| |.:.||.:|.||.|||:|:||:||..|..|::.|  :.|..|
  Rat   309 KALGITEMFEPSKANFAKITRS-ESLHVSHILQKAKIEVSEDGTKAAVVTTAILIAR--SSPPWF 370

  Fly   349 QADRPFLYVIWNKKN--ILFAG 368
            ..|||||:.|.:...  |||.|
  Rat   371 IVDRPFLFCIRHNPTGAILFLG 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 111/347 (32%)
Serpine2NP_062070.1 serpinE2_GDN 21..395 CDD:381039 111/347 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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