DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb1a

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001026812.1 Gene:Serpinb1a / 291091 RGDID:1306203 Length:379 Species:Rattus norvegicus


Alignment Length:375 Identity:135/375 - (36%)
Similarity:218/375 - (58%) Gaps:16/375 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE 71
            :.:...:.|..|||..||......|:.||||||.:.:|:.|.|::|.||.:::|..||.|  ..:
  Rat     3 QLSSANSLFALELFHTLSESSPTGNIFFSPFSISSALAMVFLGTKGTTAAQLSKTFHFDS--VED 65

  Fly    72 VAQTFQFV---LEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFA-LNDAAAQ 132
            |...||.:   :.|...|:.|::||:||.::.....|.:.::.::.|.::...::|. .::.|.:
  Rat    66 VHSRFQSLNAEVSKRGASHTLKLANRLYGEKTYNFLPEFLTSTQKMYGADLAPVDFQHASEDARK 130

  Fly   133 AINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKI 197
            .||.||..:|:|||.||::.......|:|||:||::|||.|..||.::.|.:..|.:.::....:
  Rat   131 EINQWVKGQTEGKIPELLAVGVVDSMTKLVLVNAIYFKGMWEEKFMKQDTTDAPFRLNKKNTKSV 195

  Fly   198 NYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQ----ERTGIYALAEKLKTVNLVDLAD 258
            ..|.||.||.:|:..||.|..||||||..:|||.:|||:    |.||:..:.|::....|.:...
  Rat   196 KMMYQKKKFFFGYISDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQITLEKLREWTK 260

  Fly   259 KLTVE--EVHVKFPKFKVDYSLELAEKLKQLGITKMF-TDQAEFSNLLESPEGVFVSKVLHKATI 320
            :..:|  :||||.|:||::.|..|...|.:||:..:| :.:|:.|.:..|.: :|:||::|||.:
  Rat   261 RENLENIDVHVKLPRFKIEESYILNSNLGRLGLQDLFNSSKADLSGMSGSRD-LFISKIVHKAFV 324

  Fly   321 EVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNK--KNILFAG 368
            |||||||||||||..|....|:....:|.||.||::.|.:.  .|:||.|
  Rat   325 EVNEEGTEAAAATAGIATFCMLLPEEEFTADHPFIFFIRHNPTANVLFLG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 135/369 (37%)
Serpinb1aNP_001026812.1 SERPIN 4..379 CDD:294093 135/374 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2400
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3374
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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