DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb6a

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_006253933.1 Gene:Serpinb6a / 291085 RGDID:735108 Length:400 Species:Rattus norvegicus


Alignment Length:384 Identity:130/384 - (33%)
Similarity:212/384 - (55%) Gaps:25/384 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGARFT--------SELFQLLSAGGLKE----NVVFSPFSIQTCIALAFAGSQGETADEIAKALH 63
            ||.|||        :.:|.|.....|.|    |:..||.||...:.:.|.|::|.||.::.:.|.
  Rat    15 GGYRFTIMDHLQEGNGIFALKLLKTLSEDSSNNIFLSPISISAALTMVFMGAKGMTASQMVQTLS 79

  Fly    64 F---VSNFPPEVAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESI 122
            .   ..|...:|.|.||.:|.:...:.   ||:.||:|:.::...:..:::.|.::.|.:|.|.:
  Rat    80 LDKCSGNGGGDVHQGFQSLLAEVNKTGTQYLLKTANRLFGEKTCDILASFKDACRKFYEAEMEEL 144

  Fly   123 NF-ALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDI 186
            :| ...:.:.|.||.||..||:.||.||::......:|.|||:||::|||:|..:|::|.|.|..
  Rat   145 DFKGDTEQSRQRINTWVAKKTEDKIKELLAPGIVDPDTVLVLVNAIYFKGNWDKQFNKEHTREKP 209

  Fly   187 FWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTV 251
            |.|.:.|:..:..|..|:.|...:..::....|.:||..::|:|.::||.|...:..:.::|...
  Rat   210 FKVSKTEEKPVQMMFMKSTFKMTYIGEIFTKILLLPYAGNELNMIIMLPDEHIELKTVEKELTYE 274

  Fly   252 NLVDLA--DKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTD-QAEFSNLLESPEGVFVSK 313
            ..::..  |.|..|||.|..|:||::.:.::...|.:||:|..|.: :|:||. :.|.:|:|:||
  Rat   275 KFIEWTRLDMLDEEEVEVFLPRFKLEENYDMKVVLGKLGMTDAFMEGRADFSG-IASKQGLFLSK 338

  Fly   314 VLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWN--KKNILFAGAF 370
            |:|||.:|||||||||.||||..:..|.:.|..:|.||.|||:.|.:  .|.|||.|.|
  Rat   339 VIHKAFVEVNEEGTEAVAATGSTITMRCLRFTPRFLADHPFLFFIQHVKTKGILFCGRF 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 127/380 (33%)
Serpinb6aXP_006253933.1 SERPIN 25..400 CDD:294093 125/374 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2400
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3374
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.780

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