DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and HMSD

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_016881199.1 Gene:HMSD / 284293 HGNCID:23037 Length:217 Species:Homo sapiens


Alignment Length:113 Identity:28/113 - (24%)
Similarity:60/113 - (53%) Gaps:8/113 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SIQTCIALAFAGSQGETADEIAKALHF--VSNFPPEVAQTFQFVLEKYRNSN---LLRVANKLYV 97
            ||.:.:|:.|.|::|.||.::::||.|  :.....::.:.||.:|.....::   :||.||.|:.
Human     2 SISSALAMVFMGAKGNTAAQMSQALCFSKIGGEDGDIHRGFQSLLVAINRTDTEYVLRTANGLFG 66

  Fly    98 QEGKQLKPAYQSAIKEQYHSEAESINFALNDA--AAQAINAWVNAKTQ 143
            ::.......:..:..:.|.:..:.::| :||.  :...:|:||..||:
Human    67 EKSYDFLTGFTDSCGKFYQATIKQLDF-VNDTEKSTTRVNSWVADKTK 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 28/113 (25%)
HMSDXP_016881199.1 serpin 1..>113 CDD:476815 27/111 (24%)

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