DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb1b

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_766640.1 Gene:Serpinb1b / 282663 MGIID:2445361 Length:382 Species:Mus musculus


Alignment Length:370 Identity:133/370 - (35%)
Similarity:214/370 - (57%) Gaps:19/370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQTFQFV 79
            ||.|||..|.......|:.||||||.:.:|:.|.|::|.||.:::|.|||.|  ..::...||.:
Mouse    11 FTLELFHTLKESSPTGNIFFSPFSISSSLAMVFLGAKGSTAAQLSKTLHFDS--VEDIHSCFQSL 73

  Fly    80 ---LEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFA-LNDAAAQAINAWVNA 140
               :.|...|:.|::||:||.::.....|.:.::.::.|.::..:::|. .::.|.:.||.||..
Mouse    74 TAEVSKLGASHTLKLANRLYGEKTYNFLPEFLASTQKMYSADLAAVDFQHASEDARKEINQWVKG 138

  Fly   141 KTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAK 205
            :|:|||.||::.......|:|||:||::|||.|..:|....|....|.:.:::...:..|.||.|
Mouse   139 QTEGKIPELLAKGVVDSMTKLVLVNAIYFKGIWEEQFMTRETINAPFRLNKKDTKTVKMMYQKKK 203

  Fly   206 FNYGFFEDLGCTALEMPYQDSDLSMFVLLPQ----ERTGIYALAEKLKTVNLVDLA--DKLTVEE 264
            |.:|:..||.|..||||||..:|||.:|||:    |.||:..:.|:|....|.:..  :.|...:
Mouse   204 FPFGYISDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQLTLGKLHEWTKHENLRNID 268

  Fly   265 VHVKFPKFKVDYSLELAEKLKQLGITKMFTD-QAEFSNLLESPEGVFVSKVLHKATIEVNEEGTE 328
            ||||.|:||::.|..|...|..||:..:|:. :|:.|.:..|.: :||||::||:.::|||:|||
Mouse   269 VHVKLPRFKMEESYILNSNLCCLGVQDLFSSGKADLSGMSGSRD-LFVSKIVHKSFVDVNEQGTE 332

  Fly   329 AAAATG---MIMMTRMMTFPLQFQADRPFLYVIWNK--KNILFAG 368
            ||||||   .::..:|.|....|..|.|||:.|.:.  .|::|.|
Mouse   333 AAAATGGIIQVLCEKMPTPQEVFTVDHPFLFFIRHNPTANMIFFG 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 132/368 (36%)
Serpinb1bNP_766640.1 serpinB1_LEI 1..382 CDD:381028 133/370 (36%)
CARD-binding motif (CBM). /evidence=ECO:0000250|UniProtKB:P30740 352..382 9/26 (35%)

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