DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina3b

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:371 Identity:102/371 - (27%)
Similarity:186/371 - (50%) Gaps:19/371 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NLEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF--VSN 67
            :|..|.....|....::.|:.....:|:.||||.|.|.:.....|::|.|.:||.:.|.|  ...
Mouse    44 SLTLASINTDFAFSFYKELALKNPHKNIAFSPFGIATALNSLTLGAKGNTLEEILEVLKFNLTET 108

  Fly    68 FPPEVAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDA 129
            ...::.|.|:.:|::..:..   .:|..|.|:|::..|:...::...:..||:|..:.||.....
Mouse   109 SEADIHQGFKHLLQRLSHPGDQVQIRTGNALFVEKHLQILAEFKEKARALYHTEVFTANFQQPHE 173

  Fly   130 AAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQ 194
            |.:.||::::.:|||||.||||  ....||.:|::|.|.||..|...|:.:.|....|.|.....
Mouse   174 AMKLINSYMSNQTQGKIKELVS--DMDGNTSMVIVNDLFFKAEWMVPFNSDDTFMGKFIVDRSRH 236

  Fly   195 VKINYMNQK-AKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLAD 258
            ||:..|..| .:..|...|:|.||.:|:.|:.:..:||:|..|.:  :..:...|:...|.....
Mouse   237 VKVPMMKTKNLRTPYFRDEELKCTVVELNYKGNGKAMFILPDQGK--MQQVEASLQPGTLKKWRK 299

  Fly   259 KL---TVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATI 320
            .|   .::|:|:  |||.:.....|.:.|.:|||.::|:.||:.|. :...:.:.||:::|...:
Mouse   300 SLRPRKIKELHL--PKFSLSQHYNLEDILPELGIRELFSTQADLSG-ITGVKNITVSEMIHSTEL 361

  Fly   321 EVNEEGTEAAAAT--GMIMMTRMMTFPLQFQADRPFLYVIWNKKNI 364
            ::.|:|||..|.|  |...|:..:. |:..:.:..|||::.::.::
Mouse   362 DMTEKGTEGDAITIVGYNFMSAKLK-PVFVKFEDQFLYIVLDQGDL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 100/363 (28%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 100/364 (27%)
RCL 367..392 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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