DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina4

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:389 Identity:125/389 - (32%)
Similarity:195/389 - (50%) Gaps:40/389 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFP-- 69
            :.|.|.|.|...|:.|:::...::|:.|||.||...:|:...|:.|:|..:|.:.|.|  |..  
  Rat    47 QIASGNANFAFRLYHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGF--NLTKL 109

  Fly    70 --PEVAQTF---QFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDA 129
              ||:.:.|   |..:.:......:.|.:.|.:.:..|:...:.|||:..|:|:....||...:|
  Rat   110 SLPEIHEGFRSLQHTIARPFTEPQISVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKEA 174

  Fly   130 AAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQ 194
            |.|.||.:|...|||||..|||  ..|.:.::||:|.:.|:|.|...|...|.....|:|.|...
  Rat   175 AVQLINNYVKQNTQGKIKNLVS--DLSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTV 237

  Fly   195 VKINYMNQKAKFNYGFFED--LGCTALEMPYQDSDLSMFVLLPQ----ERTGIYALAEKLKTVNL 253
            |||..|.|. |.::.:.||  :.||.|.|.|:...::.|:|..|    |...:.:....|:...|
  Rat   238 VKIPMMLQD-KEDHWYLEDRRVPCTVLRMDYRGDAVAFFILPDQGKMNEVEQVLSPGMLLRWKRL 301

  Fly   254 VDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKA 318
              |.::....::.::.|||.:..|.||.|.|..||...:||..|.||| :...|.:::|||.||.
  Rat   302 --LQNRFFYRKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSN-ISKKEKLYLSKVFHKT 363

  Fly   319 TIEVNEEGTEAAAATGMIMMTRMMTFPLQFQA---------DRPFLYVIW--NKKNILFAGAFV 371
            .::|||.||:||||||        :|...|.|         :||||.:::  :.::|||.|..|
  Rat   364 VLDVNEVGTKAAAATG--------SFATFFSAQPKKRYLIFNRPFLVILYSTSSQDILFMGKVV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 122/380 (32%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 122/381 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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