DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb6d

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001070258.1 Gene:Serpinb6d / 238568 MGIID:2667783 Length:375 Species:Mus musculus


Alignment Length:364 Identity:120/364 - (32%)
Similarity:200/364 - (54%) Gaps:24/364 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NLEFARGGARFTSELFQLLSA--GGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF--V 65
            |.:||          |:||.|  ....:|:..||.||.:.:|:...|::..||.:|.:.|..  .
Mouse     8 NTKFA----------FKLLKALDDDTSKNIFLSPPSIASSLAMTLLGAKENTARQIRQTLSLDKC 62

  Fly    66 SNFPPE-VAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINF-A 125
            |:.|.| :.|.|..:|.:...::   :|:..|:|:|::...:|.:::.|.::.|.:|.|.::| .
Mouse    63 SSDPCEDIHQDFHLLLNEVNKTDPGIILKTENRLFVEKTFHIKKSFKDASQKFYKAEIEELDFKG 127

  Fly   126 LNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVG 190
            ..:.:.|.||.||...|..||.:|:|..|.:.||||||:|..:|||.|...|::|.|.|..|.|.
Mouse   128 DTEQSRQHINTWVTKNTDEKIKDLLSPGSVNSNTRLVLVNDFYFKGYWEKPFNKEDTREMPFRVS 192

  Fly   191 EEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVD 255
            :.....:..|.||:.|...:.|::....|.:||..:.|:|.::||.|...:..|.:|:.....|:
Mouse   193 KNVVKPVQMMFQKSTFKITYIEEISTKILLLPYAGNKLNMIIMLPDEHVELRMLEKKMTYEKFVE 257

  Fly   256 LA--DKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTD-QAEFSNLLESPEGVFVSKVLHK 317
            ..  ||:..|||.|..|:||::...::...|.::|:|..|.: :|:||. :.|.:|:|:|||::|
Mouse   258 WTSLDKMNEEEVEVFLPRFKLEEIYDMNNVLYKMGMTDAFEEGRADFSG-ISSKQGLFLSKVIYK 321

  Fly   318 ATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLY 356
            |.|||.|:||:.||||.::||....| ...|.||.||::
Mouse   322 AFIEVIEKGTKVAAATDIVMMGASPT-THTFCADHPFIF 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 117/354 (33%)
Serpinb6dNP_001070258.1 serpin 1..375 CDD:476815 120/364 (33%)

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