DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina3f

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001028507.2 Gene:Serpina3f / 238393 MGIID:2182838 Length:445 Species:Mus musculus


Alignment Length:369 Identity:117/369 - (31%)
Similarity:193/369 - (52%) Gaps:26/369 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NLEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF-VSNF 68
            :|..|.....|...|::.|......||||||||||.|.:||...|::..|..||.:.|.| ::..
Mouse    34 SLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTET 98

  Fly    69 P-PEVAQTFQFVLE---KYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDA 129
            | |::.|.|:::|:   :..|...:...:.|::::..|:...::...:..|.:||.:.:|.....
Mouse    99 PEPDIHQGFRYLLDLLSQPGNQVQISTGSALFIEKHLQILAEFKEKARALYQAEAFTADFQQPLE 163

  Fly   130 AAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQ 194
            |.:.||.:|:..|||||.||:|  .....|.:||:|.::|||.|...|..:.|.:..|::.|...
Mouse   164 ATKLINDYVSNHTQGKIKELIS--DLDKRTLMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRS 226

  Fly   195 VKINYMNQKAKFN-----YGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLV 254
            ||:..|    |.|     |...|:|.||.:|:.|..:..:||:|..|.:  :..:...|:...|.
Mouse   227 VKVPMM----KINNLTTPYFRDEELSCTVVELKYTGNASAMFILPDQGK--MQQVEASLQPETLR 285

  Fly   255 DLADKLTVEEVH-VKFPKFKV--DYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLH 316
            :..|.|....:: :..|||.:  |||||  ..|.:|||.::|:.||:.| .:...:.:..|:|:|
Mouse   286 NWKDSLKPRLINELCLPKFSISTDYSLE--HILPELGIRELFSTQADLS-AITGTKDLRTSQVVH 347

  Fly   317 KATIEVNEEGTEAAAATGM--IMMTRMMTFPLQFQADRPFLYVI 358
            ||.::|.|.||||||.||.  :...:.:.:.::...|||||.:|
Mouse   348 KAVLDVAETGTEAAAGTGYQNLQCCQGVIYSMKIYFDRPFLMII 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 115/359 (32%)
Serpina3fNP_001028507.2 serpinA3_A1AC 27..409 CDD:381019 117/369 (32%)
RCL 357..382 8/24 (33%)

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