DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina3k

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:378 Identity:122/378 - (32%)
Similarity:203/378 - (53%) Gaps:24/378 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DFNLEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSN 67
            |.:|..|.....|...|::.|:.....:|:||||.||...:||...|::|:|.:||.:.|.|...
Mouse    43 DDSLTLASVNTDFAFSLYKKLALKNQDKNIVFSPLSISAALALVSLGAKGKTMEEILEGLKFNLT 107

  Fly    68 FPPE--VAQTFQFVLEKY---RNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALN 127
            ..||  :.|.|..:|:..   .:.:.:.:.|.:::::..|:...:....:..|.:||.:.:|...
Mouse   108 ETPEADIHQGFGNLLQSLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQP 172

  Fly   128 DAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEE 192
            ..|...||.:|:.:|||.|.:|:|  ...|.|.:||:|.::|||.|...|..:.|.|..|::.|:
Mouse   173 TEAKNLINDYVSNQTQGMIKKLIS--ELDDGTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEK 235

  Fly   193 EQVKINYMNQKAKFNYGF-FEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDL 256
            ..||:..|..|......| .|:|.|:.||:.|..:..::.:|..|.|  :..:...|:...|...
Mouse   236 RSVKVPMMKMKLLTARHFRDEELSCSVLELKYTGNASALLILPDQGR--MQQVEASLQPETLRKW 298

  Fly   257 ADKL---TVEEVHVKFPKFKV--DYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLH 316
            ...|   .:||:::  |||.:  ||.|| .:.|.::||.::||:||:.|.:.|:.: :.||:|:|
Mouse   299 RKTLFSSQIEELNL--PKFSIASDYRLE-EDVLPEMGIKEVFTEQADLSGITEAKK-LSVSQVVH 359

  Fly   317 KATIEVNEEGTEAAAATGMIMMTRMMTFP-LQFQADRPFLYVIW--NKKNILF 366
            ||.::|.|.|||||||||:|...|....| :.|  :||||.||:  :.::|||
Mouse   360 KAVLDVAETGTEAAAATGVIGGIRKAVLPAVCF--NRPFLIVIYHTSAQSILF 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 119/368 (32%)
Serpina3kNP_035588.2 SERPIN 57..417 CDD:214513 118/364 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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