DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina1d

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_033272.1 Gene:Serpina1d / 20703 MGIID:891968 Length:413 Species:Mus musculus


Alignment Length:375 Identity:114/375 - (30%)
Similarity:179/375 - (47%) Gaps:19/375 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF--VSNFP 69
            |.|.....|...|::.|.......|:.|||.||.|..|:...||:|:|..:|.:.|.|  .....
Mouse    43 EIATNLGDFALRLYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSE 107

  Fly    70 PEVAQTFQFVLEKYR--NSNL-LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAA 131
            .::.::||.:|:...  :|.| |...|.|:|....:|...:....|..|.:|..|:|||.::.|.
Mouse   108 ADIHKSFQHLLQTLNRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAK 172

  Fly   132 QAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVK 196
            :.||.:|...|||||.|.|.  ....:|...|.|.:.|||.|...|..|.|||..|.|.|...||
Mouse   173 KVINDFVEKGTQGKIVEAVK--KLDQDTVFALANYILFKGKWKQPFDPENTEEAEFHVDESTTVK 235

  Fly   197 INYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVD---LAD 258
            :..|......:......|....|.|.|..:..::| |||.:  |.....|:.....|:.   |..
Mouse   236 VPMMTLSGMLDVHHCSMLSSWVLLMDYAGNTTAVF-LLPDD--GKMQHLEQTLNKELISQFLLNR 297

  Fly   259 KLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVN 323
            :.:..::|:  |:..:..:..|...:..||||::|.:.|:.|.:.|....:.:||.:|||.:.::
Mouse   298 RRSDAQIHI--PRLSISGNYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAVLTID 360

  Fly   324 EEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNK--KNILFAGAFV 371
            |.||||||||.:.:.|..|...::|  |.|||::|:.:  ::.:|.|..|
Mouse   361 ETGTEAAAATVLQVATYSMPPIVRF--DHPFLFIIFEEHTQSPIFVGKVV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 111/366 (30%)
Serpina1dNP_033272.1 SERPIN 53..410 CDD:214513 111/365 (30%)
RCL 368..387 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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