DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinf1

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_035470.3 Gene:Serpinf1 / 20317 MGIID:108080 Length:417 Species:Mus musculus


Alignment Length:389 Identity:102/389 - (26%)
Similarity:188/389 - (48%) Gaps:58/389 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF--VSNFP 69
            :.|...:.|..:|::|.|:.....||:.||.|:.|.::....|::..|...|.:||::  ::|  
Mouse    52 KLAAAVSNFGYDLYRLRSSASPTGNVLLSPLSVATALSALSLGAEHRTESVIHRALYYDLITN-- 114

  Fly    70 PEVAQTFQFVLEKY----RNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESI--NFALND 128
            |::..|::.:|...    :|   |:.|:::..:...::|.::.:.:::.|.:....:  |..:: 
Mouse   115 PDIHSTYKELLASVTAPEKN---LKSASRIVFERKLRVKSSFVAPLEKSYGTRPRILTGNPRVD- 175

  Fly   129 AAAQAINAWVNAKTQGKIT----ELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWV 189
              .|.||.||.|:.:|||.    |:.||.|      ::||...:|||.|..||...:|....|.:
Mouse   176 --LQEINNWVQAQMKGKIARSTREMPSALS------ILLLGVAYFKGQWVTKFDSRKTTLQDFHL 232

  Fly   190 GEEEQVKINYMNQ-KAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNL 253
            .|:..|::..|:. ||...||...||.|...::|...| :|:...||           ...|.||
Mouse   233 DEDRTVRVPMMSDPKAILRYGLDSDLNCKIAQLPLTGS-MSIIFFLP-----------LTVTQNL 285

  Fly   254 VDLADKLTVEEVH------------VKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESP 306
            ..:.:.||.|.:|            :..||.|:.:..||.:.|:.:.:..:| :..:||.:...|
Mouse   286 TMIEESLTSEFIHDIDRELKTIQAVLTVPKLKLSFEGELTKSLQDMKLQSLF-ESPDFSKITGKP 349

  Fly   307 EGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKKN--ILFAG 368
              |.:::|.|:|..|.||||..::.:.|  :....:||||.:..::|||:|:.:...  :||.|
Mouse   350 --VKLTQVEHRAAFEWNEEGAGSSPSPG--LQPVRLTFPLDYHLNQPFLFVLRDTDTGALLFIG 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 101/383 (26%)
Serpinf1NP_035470.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..41
PEDF 39..414 CDD:239007 102/389 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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