DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb2

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001167641.1 Gene:Serpinb2 / 18788 MGIID:97609 Length:415 Species:Mus musculus


Alignment Length:412 Identity:124/412 - (30%)
Similarity:197/412 - (47%) Gaps:50/412 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF------- 64
            |.:.....|...|.:.:......:|:..||:||.:.:|:...|:.|.|..::||.|.|       
Mouse     3 ELSMANTMFALNLLKQIEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGSYG 67

  Fly    65 -------------------VSNFPPEVAQ------------TFQFVLEKYRNSNLLRVANKLYVQ 98
                               ..|:|..:.|            :....:...:...||..||||:.:
Mouse    68 ITTRNPENFSGCDFAQQIQKENYPSAILQAQAGDKIHSAFSSLSSTINTPQGDYLLESANKLFGE 132

  Fly    99 EGKQLKPAYQSAIKEQYHSEAESINF-ALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLV 162
            :..:.|..|....|:.|.:|.|:::| ...:.|.:.||:||..:|:|:|..|:...|..::|::|
Mouse   133 KSARFKEEYIQLSKKYYSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDEDTKMV 197

  Fly   163 LLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSD 227
            |:||::|||.|...|.::......|.|...|.:.:..|...||.|.|:.:||....||:|: ..:
Mouse   198 LVNAVYFKGKWKTPFEKKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKDLKTQILELPH-TGN 261

  Fly   228 LSMFVLLPQE----RTGIYALAEKLKTVNLVDLADKLTVEE--VHVKFPKFKVDYSLELAEKLKQ 286
            :||.:|||.|    .||:..|..::...|......|.|::|  |.|..||||:..|.||...|:.
Mouse   262 ISMLLLLPDEIEDASTGLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYELKSILQS 326

  Fly   287 LGITKMFT-DQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQA 350
            :|:...|. .:|.||.:.|..: :|:|:|.|:|:::|.||||.||..||.:|..|......||.|
Mouse   327 MGMEDAFNKGKANFSGMSERND-LFLSEVFHQASVDVTEEGTVAAGGTGAVMTGRTGHGGPQFVA 390

  Fly   351 DRPFLYVIWNK--KNILFAGAF 370
            |.|||:.|.:|  ..|||.|.|
Mouse   391 DHPFLFFIMDKITHTILFVGRF 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 122/404 (30%)
Serpinb2NP_001167641.1 SERPIN 4..415 CDD:294093 123/411 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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