DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb2

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_035241.1 Gene:Serpinb2 / 18788 MGIID:97609 Length:415 Species:Mus musculus


Alignment Length:412 Identity:124/412 - (30%)
Similarity:197/412 - (47%) Gaps:50/412 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF------- 64
            |.:.....|...|.:.:......:|:..||:||.:.:|:...|:.|.|..::||.|.|       
Mouse     3 ELSMANTMFALNLLKQIEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGSYG 67

  Fly    65 -------------------VSNFPPEVAQ------------TFQFVLEKYRNSNLLRVANKLYVQ 98
                               ..|:|..:.|            :....:...:...||..||||:.:
Mouse    68 ITTRNPENFSGCDFAQQIQKENYPSAILQAQAGDKIHSAFSSLSSTINTPQGDYLLESANKLFGE 132

  Fly    99 EGKQLKPAYQSAIKEQYHSEAESINF-ALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLV 162
            :..:.|..|....|:.|.:|.|:::| ...:.|.:.||:||..:|:|:|..|:...|..::|::|
Mouse   133 KSARFKEEYIQLSKKYYSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDEDTKMV 197

  Fly   163 LLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSD 227
            |:||::|||.|...|.::......|.|...|.:.:..|...||.|.|:.:||....||:|: ..:
Mouse   198 LVNAVYFKGKWKTPFEKKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKDLKTQILELPH-TGN 261

  Fly   228 LSMFVLLPQE----RTGIYALAEKLKTVNLVDLADKLTVEE--VHVKFPKFKVDYSLELAEKLKQ 286
            :||.:|||.|    .||:..|..::...|......|.|::|  |.|..||||:..|.||...|:.
Mouse   262 ISMLLLLPDEIEDASTGLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYELKSILQS 326

  Fly   287 LGITKMFT-DQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQA 350
            :|:...|. .:|.||.:.|..: :|:|:|.|:|:::|.||||.||..||.:|..|......||.|
Mouse   327 MGMEDAFNKGKANFSGMSERND-LFLSEVFHQASVDVTEEGTVAAGGTGAVMTGRTGHGGPQFVA 390

  Fly   351 DRPFLYVIWNK--KNILFAGAF 370
            |.|||:.|.:|  ..|||.|.|
Mouse   391 DHPFLFFIMDKITHTILFVGRF 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 121/400 (30%)
Serpinb2NP_035241.1 serpinB2_PAI-2 2..415 CDD:381029 124/412 (30%)

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