DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and srp-7

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:365 Identity:116/365 - (31%)
Similarity:200/365 - (54%) Gaps:34/365 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKAL-----------HFVSNFPPEVAQT 75
            ||....:.|::.|||.||...::|....::|||.|:|.:||           ||        |..
 Worm    22 LLRQQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHF--------ANI 78

  Fly    76 FQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVNA 140
            ...:|...|.:. :::||.::.:.|.::|.:|...:|:.|::.|.|::|...:|.|:|||.:|..
 Worm    79 SAALLAAERGTE-VKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRE 142

  Fly   141 KTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAK 205
            .|...|.:::.:||.:.:...||.|||:||..|.:||.::.|.:..|:...:.:.:|:::: .:.
 Worm   143 NTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH-ASS 206

  Fly   206 FNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVN---LVDLADKLTVEEVHV 267
            .:..:.|:.....|.:||:|:..::.:.||:.|.|   |.|.|||::   :..|...::...|:|
 Worm   207 VSRDYAENDQFQVLSLPYKDNTFALTIFLPKTRFG---LTESLKTLDSATIQHLLSNVSSTSVNV 268

  Fly   268 KFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAA 332
            :.||:|::..|.|.|.|:.|||.|.|.:.|:..|:   .:|::||||.|||.|||:||||:||||
 Worm   269 QIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNM---ADGLYVSKVTHKALIEVDEEGTKAAAA 330

  Fly   333 TGMIMMTRMMTF----PLQFQADRPFLYVIWNKKNILFAG 368
            |.:.:..:...|    |..|.||.||.:|:....:.||.|
 Worm   331 TTVSISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 116/365 (32%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 116/365 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10598
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.960

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