DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpini2

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001127881.1 Gene:Serpini2 / 171149 RGDID:619897 Length:405 Species:Rattus norvegicus


Alignment Length:363 Identity:118/363 - (32%)
Similarity:197/363 - (54%) Gaps:9/363 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE---VAQ 74
            |.|..:|::.:|... |.||:|||......:.:...|::|:...:|.:.|........|   |.:
  Rat    27 AEFAVDLYKAISLSN-KNNVIFSPLGTTVLLGMVQLGAKGKAQQQIMQTLRMQKTSTGEEFSVLK 90

  Fly    75 TFQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVN 139
            :....:.|.:......:|:.||:|||..:|.:|..:.||.:.|..:.::|.....:||||:.||.
  Rat    91 SLFSAISKKKQEFTFNLASALYLQEGFIVKESYLHSNKEFFQSATKLVDFLDAKTSAQAISTWVE 155

  Fly   140 AKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKA 204
            :||.|||..:.|.:.|...|||||:||::|||.|..||.:|.||...|...:...|||..|....
  Rat   156 SKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTDFSKKDGSTVKIPMMKALL 220

  Fly   205 KFNYGFFEDLGCT--ALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVHV 267
            :..||:|.:...|  .||:||:..:.|:.:|||.|...|..:.:::...::.....:|..|||.|
  Rat   221 RAKYGYFSESSMTYQVLELPYKADEFSLVILLPTEDVNIEEVEKQVTARHVQKWFSELHEEEVEV 285

  Fly   268 KFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAA 332
            ..|:||::..|:..|.|..|.:|::|:...:.|.:.:|.| ::||:.:.|...|:||:|:||||:
  Rat   286 SLPRFKIEQKLDFKEALFSLNVTEIFSGGCDLSGITDSSE-LYVSRAMQKVFFEINEDGSEAAAS 349

  Fly   333 TGMIMMTRMMTFPLQFQADRPFLYVIWN--KKNILFAG 368
            ||:.:...|.....||.|:.|||:::.:  .::|||.|
  Rat   350 TGINIPAIMSLTQTQFLANHPFLFIMKHIQTESILFMG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 118/363 (33%)
Serpini2NP_001127881.1 SERPIN 23..405 CDD:294093 118/363 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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