DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina3c

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:364 Identity:108/364 - (29%)
Similarity:188/364 - (51%) Gaps:20/364 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NLEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFP 69
            :|..|.....|...|::.|:......|:||||.||...:|:...|::|.|.:||.:.|:|.....
Mouse    63 SLTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTET 127

  Fly    70 PE--VAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDA 129
            ||  :.|.|..:|::..:..   .:...:.|:|::..|:...:|...:..|.:||.:.:|.....
Mouse   128 PEADIHQGFGHLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLE 192

  Fly   130 AAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQ 194
            |.:.||.:|:.:||.||..|:|  ....:|.:||:|.::|||.|...|:...|.|..|::..:..
Mouse   193 ATKLINDYVSNQTQRKIKGLIS--DLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRS 255

  Fly   195 VKINYMNQKAKFNYGFF--EDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLA 257
            ||:..|..|. ....:|  |:|.||.:|:.|:.:..::|:|..|.|  :..:...|:...|....
Mouse   256 VKVPMMKIKT-LTTPYFRDEELSCTVVELKYKGNASALFILPDQGR--MQQVEASLQPETLRKWK 317

  Fly   258 DKLTVEEV-HVKFPKFKV--DYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKAT 319
            :.|...:: .:..|||.:  ||||:  ..|.:|||.::|:.||:.|.:..:.: :.||:::|||.
Mouse   318 NSLRPRKMGELYLPKFSISTDYSLK--NILPELGIKEIFSKQADLSGITGTKD-LIVSQMVHKAV 379

  Fly   320 IEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVI 358
            ::|.|.|||..||||:..  |:::.......:|.||.||
Mouse   380 LDVAETGTEGVAATGVNF--RILSRRTSLWFNRTFLMVI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 106/356 (30%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 108/364 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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