DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinh1

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_033955.2 Gene:Serpinh1 / 12406 MGIID:88283 Length:417 Species:Mus musculus


Alignment Length:369 Identity:91/369 - (24%)
Similarity:160/369 - (43%) Gaps:17/369 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQT- 75
            |..|:  |:|.::.....||::.||..:.:.:.|...|.:..||.: |||:........|...| 
Mouse    48 GLAFS--LYQAMAKDQAVENILLSPLVVASSLGLVSLGGKATTASQ-AKAVLSAEKLRDEEVHTG 109

  Fly    76 FQFVLEKYRNSNLLRV----ANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINA 136
            ...:|....||....|    .::||..........:..:.|:.|:.|...|||....:|.|:||.
Mouse   110 LGELLRSLSNSTARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRSALQSINE 174

  Fly   137 WVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMN 201
            |.:..|.||:.|:......:|..  :|:||:.||..|..||..:..:...|.|.....|.:..|:
Mouse   175 WASQTTDGKLPEVTKDVERTDGA--LLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMMH 237

  Fly   202 QKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVH 266
            :...:||...|......:|||......|:.:|:|.....:..|.:.|....|.....|:..:.|.
Mouse   238 RTGLYNYYDDEKEKLQMVEMPLAHKLSSLIILMPHHVEPLERLEKLLTKEQLKAWMGKMQKKAVA 302

  Fly   267 VKFPKFKVDYSLELAEKLKQLGITKMF-TDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAA 330
            :..||..|:.:.:|.:.|..||:|:.. .::|:.|. :...:.::::.|.|....|.:.||....
Mouse   303 ISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSR-MSGKKDLYLASVFHATAFEWDTEGNPFD 366

  Fly   331 AATGMIMMTRMMTFPLQFQADRPFLYVIWNKK--NILFAGAFVK 372
            ..   |.....:..|..|.||.||::::.:.:  ::||.|..|:
Mouse   367 QD---IYGREELRSPKLFYADHPFIFLVRDNQSGSLLFIGRLVR 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 88/360 (24%)
Serpinh1NP_033955.2 serpinH1_CBP1 35..416 CDD:381003 91/369 (25%)
Prevents secretion from ER. /evidence=ECO:0000305 414..417
Blue background indicates that the domain is not in the aligned region.

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