DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and Serpina6

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_031644.1 Gene:Serpina6 / 12401 MGIID:88278 Length:397 Species:Mus musculus


Alignment Length:365 Identity:100/365 - (27%)
Similarity:178/365 - (48%) Gaps:41/365 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNF--------PPE 71
            |...|::.|.|....:|.:.||.||...:|:....::|.|        .::.|.        ..|
Mouse    41 FAFNLYKRLVALNSDKNTLISPVSISMALAMLSLSTRGST--------QYLENLGFNMSKMSEAE 97

  Fly    72 VAQTFQFVLEKYRNSNL---LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQA 133
            :.|.||::....:.|:.   :.:.|.:::.:..:||.::.:..|..|.|||.:|.......|.:.
Mouse    98 IHQGFQYLNSLLQQSDTGLEMNMGNVMFLLQNLKLKDSFLADTKHYYESEALTIPSKDWTKAGEQ 162

  Fly   134 INAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKIN 198
            ||..|..||||||..:||  ....:..|:|:|.:..||.|...||.|.|.|:.|:|.|...||:.
Mouse   163 INNHVKNKTQGKIEHVVS--DLDSSATLILINYIFLKGIWKLPFSPENTREEDFYVNETSTVKVP 225

  Fly   199 YMNQKAKFNYGFFED--LGCTALEMPYQDSDLSMFVLLP---QERTGIYALAEKLKTVNLVDLAD 258
            .|.|..  |..:|.|  :.|..::|.|..:. :.|::||   |..|.:.||..     :.:|...
Mouse   226 MMVQSG--NISYFRDSAIPCQMVQMNYVGNG-TTFIILPDQGQMDTVVAALNR-----DTIDRWG 282

  Fly   259 KLTV-EEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLL-ESPEGVFVSKVLHKATIE 321
            ||.: .::::..|||.:..:.:|.:.|..:||..:||:|::|::.. ::|   ....|||||.::
Mouse   283 KLMIPRQMNLYIPKFSMSDTYDLQDVLADVGIKDLFTNQSDFADTTKDTP---LTLTVLHKAMLQ 344

  Fly   322 VNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNK 361
            ::|.....||..|..:.....:|.|::  :|||:::.::|
Mouse   345 LDEGNVLPAATNGPPVHLPSESFTLKY--NRPFIFLAFDK 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 100/365 (27%)
Serpina6NP_031644.1 serpinA6_CBG 28..397 CDD:381022 100/365 (27%)

Return to query results.
Submit another query.