DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinc1

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_543120.1 Gene:Serpinc1 / 11905 MGIID:88095 Length:465 Species:Mus musculus


Alignment Length:378 Identity:105/378 - (27%)
Similarity:199/378 - (52%) Gaps:19/378 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQ-LLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPP 70
            |.::..:||.:..:| |..:....:|:..||.||.|..|:...|:..:|..::.:...| .....
Mouse    83 ELSKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLKQLMEVFKF-DTISE 146

  Fly    71 EVAQTFQFVLEK-----YRNSNL---LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALN 127
            :.:....|...|     ||.:|.   |..||:|:..:......:||...:..|.::.:.::|..|
Mouse   147 KTSDQIHFFFAKLNCRLYRKANKSSDLVSANRLFGDKSLTFNESYQDVSEVVYGAKLQPLDFKEN 211

  Fly   128 -DAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGE 191
             :.:...||.||..||:|:|.:::...:.::.|.|||:|.::|||.|..|||.|.|.::.|:..:
Mouse   212 PEQSRVTINNWVANKTEGRIKDVIPQGAINELTALVLVNTIYFKGLWKSKFSPENTRKEPFYKVD 276

  Fly   192 EEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDL 256
            .:...:..|.|:.||.|....: |...||:|::..|::|.::||:....:..:.::|....|.:.
Mouse   277 GQSCPVPMMYQEGKFKYRRVAE-GTQVLELPFKGDDITMVLILPKPEKSLAKVEQELTPELLQEW 340

  Fly   257 ADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFT-DQAEFSNLLE-SPEGVFVSKVLHKAT 319
            .|:|:...:.|..|:|:.:....|.|:|:.:|:..:|: ::::...::. ..:.::||...|||.
Mouse   341 LDELSETMLVVHMPRFRTEDGFSLKEQLQDMGLIDLFSPEKSQLPGIVAGGRDDLYVSDAFHKAF 405

  Fly   320 IEVNEEGTEAAAATGMIMMTRMMTFP--LQFQADRPFLYVIWN--KKNILFAG 368
            :||||||:||||:|.:::..|.:. |  :.|:|:||||.:|..  ...|:|.|
Mouse   406 LEVNEEGSEAAASTSVVITGRSLN-PNRVTFKANRPFLVLIREVALNTIIFMG 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 104/372 (28%)
Serpinc1NP_543120.1 serpinC1_AT3 71..464 CDD:381002 105/378 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2402
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 232 1.000 Inparanoid score I3415
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.940

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