DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb5

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_476449.2 Gene:Serpinb5 / 116589 RGDID:69342 Length:375 Species:Rattus norvegicus


Alignment Length:369 Identity:115/369 - (31%)
Similarity:204/369 - (55%) Gaps:20/369 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF--VSNFPPEVAQTFQ 77
            |..|||:.|.......|::|||..:.|.::||..|::|:||:||.:.|||  |.:.|... ||..
  Rat    11 FAVELFKQLCEKEPAGNILFSPICLSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGF-QTIT 74

  Fly    78 FVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINF--ALNDAAAQAINAWVNA 140
            ..:.|..:...|::..:||:.:...|...:.|:.|..|.:|.|:::|  .|.:...| ||:.:..
  Rat    75 SDVNKLSSFYSLKLIKRLYIDKSLNLSTEFISSTKRPYANELETVDFKDKLEETKGQ-INSSIKE 138

  Fly   141 KTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAK 205
            .|.|...:::..:|.||.|:::::||.:|.|.|..||.|..|:|..|.:.:.:...:..||.:|.
  Rat   139 LTDGHFEDILPENSISDQTKILVVNAAYFVGKWMKKFPESETKECPFRINKTDTKPVQMMNLEAT 203

  Fly   206 FNYGFFEDLGCTALEMPYQDSDLSMFVLLPQ----ERTGIYALAEKLKTVNLVDLADKLTVEEVH 266
            |..|..:|:.|..:|:|:|:..|||.::||:    |.||:..:.::|....|:...:..|:....
  Rat   204 FCLGNIDDINCKIIELPFQNKHLSMLIVLPKDVEDESTGLEKIEKQLNPETLLQWTNPSTMANAK 268

  Fly   267 VK--FPKFKVDYSLELAEKLKQLGITKMFTDQ-AEFSNLLESPEGVFVSKVLHKATIEVNEEGTE 328
            ||  .|||||:..::....|:.||:..:|.:. ::||.:.|: :||.||.|:|:..:|:.|:|.:
  Rat   269 VKLSLPKFKVEKMIDPKASLESLGLKSLFNESTSDFSGMSET-KGVSVSNVIHRVCLEITEDGGD 332

  Fly   329 AAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKK--NILFAGAF 370
            :....|    :|::....:|:||.|||:::.:.|  ||:|.|.|
  Rat   333 SIEVPG----SRILQHKDEFKADHPFLFIVRHNKTRNIVFLGKF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 113/365 (31%)
Serpinb5NP_476449.2 serpinB5_maspin 1..375 CDD:381013 115/369 (31%)

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