DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and Serpini1

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_446231.1 Gene:Serpini1 / 116459 RGDID:619896 Length:410 Species:Rattus norvegicus


Alignment Length:377 Identity:128/377 - (33%)
Similarity:205/377 - (54%) Gaps:22/377 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GARFTSE--------LFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNF 68
            ||.|..|        ::..|.|.|..||::|||.||...:.:...|:||.|..||..::.:.|..
  Rat    18 GAAFPDETIAEWSVNVYNHLRATGEDENILFSPLSIALAMGVMELGAQGSTLKEIRHSMGYESLK 82

  Fly    69 PPE---VAQTFQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAA 130
            ..|   ..:.|..::.......::::||.|:||.|..:...:...:|..:::|...::|:.|.|.
  Rat    83 SGEEFSFLRDFSSMVSAEEGQYVMKIANSLFVQNGFHINEEFLQMMKMYFNAEVNHVDFSENVAV 147

  Fly   131 AQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQV 195
            |..||.||...|...:.:|||...|...|.|.|:||::|||:|..:|..|.|....|...:|.:|
  Rat   148 ANYINKWVENYTNSLLKDLVSPGDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEV 212

  Fly   196 KINYMNQKAKFNYGFFEDLGCTA------LEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLV 254
            :|..|.|:.:|.||.|.|....|      ||:||:..::||.::|.::...:..|...||...:.
  Rat   213 QIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLLKPQLIE 277

  Fly   255 DLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKAT 319
            :.|:.:..::|.|..|:|.|:..::|.:.||.||:|::|...|..:.:.:..| :|:||.:||:.
  Rat   278 EWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDANLTAMSDKKE-LFLSKAVHKSF 341

  Fly   320 IEVNEEGTEAAAATGMIMMTRM-MTFPLQFQADRPFLYVIWNKK--NILFAG 368
            |||||||:|||.|:|||.::|| :.|| |...|.|||::|.|:|  .|||.|
  Rat   342 IEVNEEGSEAAVASGMIAISRMAVLFP-QVIVDHPFLFLIKNRKTGTILFMG 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 127/376 (34%)
Serpini1NP_446231.1 neuroserpin 23..410 CDD:239003 125/372 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H21045
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.830

Return to query results.
Submit another query.