DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and LOC110439158

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:382 Identity:112/382 - (29%)
Similarity:188/382 - (49%) Gaps:45/382 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLL--SAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNF--PPEVAQT 75
            |...|::.|  |.....:|:.||||::...::....|:.|:|..::...:.:.|..  ..|:.|.
Zfish    43 FAFHLYKRLIESPDYQSKNIFFSPFTVSMALSKLTLGAGGDTKQQLLSGIGYNSAIFSTEEMHQL 107

  Fly    76 FQFVLEKYRNSN--LLRVANKLYVQEGKQLKP--AYQSAIKEQYHSEAESINFALNDAAAQAINA 136
            |..:||...|..  .:.:...||..:  :.||  .:...:||.||::..:::|.:.:...| ||.
Zfish   108 FHSLLEDIGNRTGVDIDIGTALYASD--RFKPHSKFLEDMKEFYHTDGFTVDFRVKETVDQ-INK 169

  Fly   137 WVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMN 201
            :|..||.|||.:.|  |....:|.:.||..::|||.|...|:.|:|.|..|.:.::..|.:..|:
Zfish   170 YVEEKTHGKINQAV--DDLEKDTLMFLLTYIYFKGKWDKPFNPEKTCESTFHIDDKTTVPVQMMH 232

  Fly   202 QKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVH 266
            |.......:..:|....|.:.|.|| .|||:.:|....|       .||:.  ||  ::|:...|
Zfish   233 QYEYLKVYYDAELSIKVLCLDYNDS-FSMFLAVPDVHMG-------RKTIE--DL--EMTISRQH 285

  Fly   267 VK--------------FPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHK 317
            ::              .||..:..|..|.:.||.:|:..||:|:|:|:.:  |.|.:|:|||:||
Zfish   286 IEKWKRSAFERKVDIYVPKLSLKTSYFLNDILKGMGMADMFSDKADFTGV--SEEKIFISKVVHK 348

  Fly   318 ATIEVNEEGTEAAAATGMIMMTRMMTFPLQ-FQADRPFLYVIWNK--KNILFAGAFV 371
            ||::::|:||.|||.| .:...::...||. ...||||:..|.::  .||||.|..|
Zfish   349 ATLDIDEKGTTAAAVT-TVQFRQLSYSPLSTLSFDRPFMIFITDQTNDNILFFGKVV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 111/379 (29%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 111/379 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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