DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and serpina1

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_004917137.1 Gene:serpina1 / 100145012 XenbaseID:XB-GENE-5804366 Length:485 Species:Xenopus tropicalis


Alignment Length:372 Identity:117/372 - (31%)
Similarity:201/372 - (54%) Gaps:14/372 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSN--FP 69
            :.|...::|..:||:.:.|....||:.|||.||.|.:|:...|::.:|.::|.:.|:|.:.  ..
 Frog   117 KIAPSNSQFAFKLFRQVVADHPSENIFFSPVSISTALAMLSLGARADTLNQIIEGLNFNNTKITE 181

  Fly    70 PEVAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAA 131
            .|:...||.:|....:.:   .|...|.|::....:|...:...:|:.|.|||.|.:|...:.|.
 Frog   182 EEIHNGFQHLLHMLNDPDRELQLNSGNALFIDNNVKLIQQFIDDVKKYYESEAFSTDFNNAEEAK 246

  Fly   132 QAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVK 196
            :.||::|..:|.|||.:|:|  |...|..|.|:|.:.|:|.|...|.|:.|::.||.|.|...|.
 Frog   247 KQINSYVEKQTHGKIVDLLS--SVDKNAVLYLINYIFFRGKWEKPFEEKFTQDGIFHVDENTNVT 309

  Fly   197 INYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLT 261
            :..|.:...:|..|.|.||||.:::||:.:..::|: ||.|.. :..:.|.|:...::....:..
 Frog   310 VPMMRRNGMYNVAFDEKLGCTVVQIPYKGNATALFI-LPDEGK-LRQVEEALEKSTIMSWKKQFR 372

  Fly   262 VEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEG 326
            .:.:.:..|||.:..:|:|.|:||:.|:|.:|:..|:.|.::|... :.|||.:|||.:.|:|.|
 Frog   373 YQSIELTIPKFSIMATLDLIEELKKFGVTDVFSQNADLSGIVEGTP-LKVSKAVHKAGLSVDETG 436

  Fly   327 TEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWN--KKNILFAGAFV 371
            |||||||...:|..|:  |.....:|.|:.:|::  .|:|||....|
 Frog   437 TEAAAATAFEIMPMMI--PPHILFNRAFVVIIYDPIPKSILFVAKVV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 115/359 (32%)
serpina1XP_004917137.1 serpin 115..484 CDD:476815 117/372 (31%)

Return to query results.
Submit another query.