DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and serpine1

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_002941247.2 Gene:serpine1 / 100127732 XenbaseID:XB-GENE-969639 Length:403 Species:Xenopus tropicalis


Alignment Length:393 Identity:120/393 - (30%)
Similarity:190/393 - (48%) Gaps:56/393 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVA 73
            |:.|..|...|||.:.|....:|:.|||:.:.:.:::..:|:.|.|.|:|.|||::     ....
 Frog    29 AQKGTSFGLRLFQEVLADQWGKNLGFSPYGVTSALSVLQSGAAGTTLDQIRKALNY-----GHKE 88

  Fly    74 QTFQFVLEKYR-----------NSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALN 127
            ......|.|.|           :...:.:|:.|:||....|.|.:....:..:|.....:||...
 Frog    89 WAVALALNKLREQISGQQKSAEDPKPVHIADGLFVQRDLSLTPGFLQRFQATFHRHLSQVNFTDV 153

  Fly   128 DAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEE 192
            ..|...||.||..||.|.|.:||.:::....||||||:|:||.|.|...|.|:.|.:..|:..:.
 Frog   154 AQAKDIINQWVENKTDGMIKDLVGSNNIPPLTRLVLLSAVHFSGKWTVPFLEKATHQRPFYRSDG 218

  Fly   193 EQVKINYMNQKAKFNY-------GFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKT 250
            ..|::..|....|:|.       |.|.|:    :|:||:..:|||.:..|.|           |.
 Frog   219 SHVQVQMMANTGKYNCSEFTTPDGDFYDV----IELPYEGEELSMLIAAPYE-----------KN 268

  Fly   251 VNLVDLADKLTVE-----EVHVK-------FPKFKVDYSLELAEKLKQLGITKMFTDQ-AEFSNL 302
            |.|..:.:.||.|     :..:|       .|||.:...::|.:.|::||||.|||.: |:||. 
 Frog   269 VPLSAITNILTPELIAQWKAQMKKVTRLLVLPKFSLLSEVDLKKPLERLGITDMFTQETADFSR- 332

  Fly   303 LESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKK--NIL 365
            |.|.:.::||:...|..:||.|:||.|:|||..|::.||.  ||:...|.|||:::.:..  .:|
 Frog   333 LSSEKPLYVSEAFQKIKVEVTEKGTRASAATAAILLARMA--PLEVIMDHPFLFMVRHNPTGTLL 395

  Fly   366 FAG 368
            |.|
 Frog   396 FVG 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 118/389 (30%)
serpine1XP_002941247.2 SERPIN 22..403 CDD:294093 120/393 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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