Sequence 1: | XP_017449758.1 | Gene: | Nrcam / 497815 | RGDID: | 3209 | Length: | 1315 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001303307.1 | Gene: | tutl / 46015 | FlyBaseID: | FBgn0010473 | Length: | 1536 | Species: | Drosophila melanogaster |
Alignment Length: | 1011 | Identity: | 219/1011 - (21%) |
---|---|---|---|
Similarity: | 354/1011 - (35%) | Gaps: | 293/1011 - (28%) |
- Green bases have known domain annotations that are detailed below.
Rat 24 CQMISALDVPLDHG-EKAKLLDDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRN 87
Rat 88 GTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSR----- 147
Rat 148 SPLWTKERLEPIILR------------------------SGQSLVLPCRPPIGLP-----PAIIF 183
Rat 184 WMDNSFQRLPQSERVSQ-GLNGDLY-FSNVLPEDTREDYICYARFNHTQTIQQKQPI---SLKVI 243
Rat 244 SVDELNDTIAANLSDTEFYGAK------SSKER------------PPTF-LTPEG----NESHKE 285
Rat 286 ELRGNVLSLECIAEGLPTPVIYWIKE--------------DGTLPVNRTFYRNFKKTLQIIHVSE 336
Rat 337 ADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNP-KPRISWLT 400
Rat 401 NGVPV-EIALDDPSRKIDGD-TIMFSNVQESSSAVYQCNASNKYG-YLLANAFVNVLAEPPRILT 462
Rat 463 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHE-----DIYVLHDNGTLEIPVAQKD 522
Rat 523 STGTYTCVARNKLGM--AKNEVHLEIKDPTRFIKQPEYAVVQR--GSKVSFEC-KVKHDHTLIPT 582
Rat 583 ILWLKDNGELPND---ERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTP 644
Rat 645 APIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAEVSGTQT 709
Rat 710 -------TAQLK---LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEP 764
Rat 765 DNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVVANVSKYIVS-GTPTFVPYLIKVQAL 828
Rat 829 NDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVN--------STLAEAH--------------WD 871
Rat 872 PVPPKSVR--------GHLQGYRIYYWKAQSSSKRN 899 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nrcam | XP_017449758.1 | IgI_NrCAM | 50..144 | CDD:409458 | 18/93 (19%) |
Ig strand B | 68..72 | CDD:409458 | 0/3 (0%) | ||
Ig strand C | 81..85 | CDD:409458 | 0/3 (0%) | ||
Ig strand E | 106..110 | CDD:409458 | 2/3 (67%) | ||
Ig strand F | 124..129 | CDD:409458 | 1/4 (25%) | ||
Ig strand G | 138..141 | CDD:409458 | 0/2 (0%) | ||
Ig | 153..242 | CDD:416386 | 18/122 (15%) | ||
Ig strand A | 153..156 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 158..162 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 165..173 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 180..186 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 189..192 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 198..202 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 204..208 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 219..227 | CDD:409353 | 1/7 (14%) | ||
Ig strand G | 230..242 | CDD:409353 | 4/14 (29%) | ||
Ig | 281..362 | CDD:416386 | 28/94 (30%) | ||
Ig strand B | 292..296 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 305..309 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 327..331 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 341..346 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 354..357 | CDD:409353 | 1/2 (50%) | ||
Ig | 366..454 | CDD:416386 | 23/91 (25%) | ||
Ig strand B | 382..386 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 395..399 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 419..423 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 433..438 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 446..449 | CDD:409353 | 1/2 (50%) | ||
Ig | 460..546 | CDD:416386 | 21/92 (23%) | ||
Ig strand A | 460..463 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 467..470 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 476..483 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 489..494 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 496..498 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 505..509 | CDD:409353 | 2/3 (67%) | ||
Ig strand E | 512..517 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 525..533 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 536..546 | CDD:409353 | 2/11 (18%) | ||
Ig | 553..637 | CDD:416386 | 22/89 (25%) | ||
Ig strand A | 553..556 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 558..562 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 565..574 | CDD:409353 | 2/9 (22%) | ||
Ig strand C | 582..587 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 590..593 | CDD:409353 | 2/2 (100%) | ||
Ig strand D | 597..602 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 603..609 | CDD:409353 | 0/5 (0%) | ||
Ig strand F | 616..624 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 627..637 | CDD:409353 | 2/9 (22%) | ||
FN3 | 651..741 | CDD:238020 | 21/99 (21%) | ||
fn3 | 754..836 | CDD:394996 | 13/82 (16%) | ||
fn3 | 852..944 | CDD:394996 | 17/78 (22%) | ||
fn3 | 957..1041 | CDD:394996 | |||
fn3 | 1075..1143 | CDD:394996 | |||
Bravo_FIGEY | 1198..1287 | CDD:404722 | |||
tutl | NP_001303307.1 | V-set | 137..250 | CDD:284989 | 23/138 (17%) |
IG_like | 137..229 | CDD:214653 | 21/117 (18%) | ||
I-set | 253..341 | CDD:254352 | 34/107 (32%) | ||
IGc2 | 268..331 | CDD:197706 | 23/75 (31%) | ||
I-set | 346..437 | CDD:254352 | 23/90 (26%) | ||
Ig | 349..437 | CDD:299845 | 23/87 (26%) | ||
Ig | 459..530 | CDD:299845 | 19/73 (26%) | ||
IG_like | 549..628 | CDD:214653 | 18/79 (23%) | ||
IGc2 | 551..617 | CDD:197706 | 16/65 (25%) | ||
FN3 | 633..725 | CDD:238020 | 24/122 (20%) | ||
FN3 | 786..874 | CDD:238020 | 18/93 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |