| Sequence 1: | XP_017449758.1 | Gene: | Nrcam / 497815 | RGDID: | 3209 | Length: | 1315 | Species: | Rattus norvegicus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_608822.1 | Gene: | bdl / 33635 | FlyBaseID: | FBgn0028482 | Length: | 719 | Species: | Drosophila melanogaster |
| Alignment Length: | 659 | Identity: | 148/659 - (22%) |
|---|---|---|---|
| Similarity: | 251/659 - (38%) | Gaps: | 159/659 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Rat 302 PTP-VIYWIKEDGTLPVNRTFYRNFKKTLQIIH---------------------VSEADSGNYQC 344
Rat 345 ----------IAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWL 399
Rat 400 TNGVPVEIALD-------DPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYL-LANAFVN---- 452
Rat 453 --VLAEPPRILTSANTLYQVIANRPALLDCAFFGS-PMPTIEWFKGTKGSALHEDIY----VLHD 510
Rat 511 -NGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHLEIKDPTRFIKQPEYAVVQR-GSKVSFEC 571
Rat 572 K-VKHDHTLIPTILW-LKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAV 634
Rat 635 LRV--VAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGL 697
Rat 698 WR--HQAEVSGTQTTAQLKLSPYVNYSFRVMAENSIG----------RSVPSE-ASEQYLTKAAE 749
Rat 750 PD--QNPTAVEGLGTEPDNL---------VITWK-PLNGFQSNGPGLQ-YKVSWRQKDGDDEWTS 801
Rat 802 VVVANVSKYIVSGTPTFVPY----------LIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNV 856
Rat 857 RVSVVNSTL 865 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Nrcam | XP_017449758.1 | IgI_NrCAM | 50..144 | CDD:409458 | |
| Ig strand B | 68..72 | CDD:409458 | |||
| Ig strand C | 81..85 | CDD:409458 | |||
| Ig strand E | 106..110 | CDD:409458 | |||
| Ig strand F | 124..129 | CDD:409458 | |||
| Ig strand G | 138..141 | CDD:409458 | |||
| Ig | 153..242 | CDD:416386 | |||
| Ig strand A | 153..156 | CDD:409353 | |||
| Ig strand A' | 158..162 | CDD:409353 | |||
| Ig strand B | 165..173 | CDD:409353 | |||
| Ig strand C | 180..186 | CDD:409353 | |||
| Ig strand C' | 189..192 | CDD:409353 | |||
| Ig strand D | 198..202 | CDD:409353 | |||
| Ig strand E | 204..208 | CDD:409353 | |||
| Ig strand F | 219..227 | CDD:409353 | |||
| Ig strand G | 230..242 | CDD:409353 | |||
| Ig | 281..362 | CDD:416386 | 15/91 (16%) | ||
| Ig strand B | 292..296 | CDD:409353 | |||
| Ig strand C | 305..309 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 327..331 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 341..346 | CDD:409353 | 2/14 (14%) | ||
| Ig strand G | 354..357 | CDD:409353 | 1/2 (50%) | ||
| Ig | 366..454 | CDD:416386 | 23/101 (23%) | ||
| Ig strand B | 382..386 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 395..399 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 419..423 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 433..438 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 446..449 | CDD:409353 | 1/2 (50%) | ||
| Ig | 460..546 | CDD:416386 | 23/93 (25%) | ||
| Ig strand A | 460..463 | CDD:409353 | 0/2 (0%) | ||
| Ig strand A' | 467..470 | CDD:409353 | 0/2 (0%) | ||
| Ig strand B | 476..483 | CDD:409353 | 4/6 (67%) | ||
| Ig strand C | 489..494 | CDD:409353 | 1/4 (25%) | ||
| Ig strand C' | 496..498 | CDD:409353 | 0/1 (0%) | ||
| Ig strand D | 505..509 | CDD:409353 | 2/7 (29%) | ||
| Ig strand E | 512..517 | CDD:409353 | 2/4 (50%) | ||
| Ig strand F | 525..533 | CDD:409353 | 4/7 (57%) | ||
| Ig strand G | 536..546 | CDD:409353 | 1/11 (9%) | ||
| Ig | 553..637 | CDD:416386 | 25/86 (29%) | ||
| Ig strand A | 553..556 | CDD:409353 | 0/2 (0%) | ||
| Ig strand A' | 558..562 | CDD:409353 | 0/3 (0%) | ||
| Ig strand B | 565..574 | CDD:409353 | 1/9 (11%) | ||
| Ig strand C | 582..587 | CDD:409353 | 2/5 (40%) | ||
| Ig strand C' | 590..593 | CDD:409353 | 0/2 (0%) | ||
| Ig strand D | 597..602 | CDD:409353 | 3/4 (75%) | ||
| Ig strand E | 603..609 | CDD:409353 | 1/5 (20%) | ||
| Ig strand F | 616..624 | CDD:409353 | 4/7 (57%) | ||
| Ig strand G | 627..637 | CDD:409353 | 3/9 (33%) | ||
| FN3 | 651..741 | CDD:238020 | 23/102 (23%) | ||
| fn3 | 754..836 | CDD:394996 | 25/102 (25%) | ||
| fn3 | 852..944 | CDD:394996 | 3/14 (21%) | ||
| fn3 | 957..1041 | CDD:394996 | |||
| fn3 | 1075..1143 | CDD:394996 | |||
| Bravo_FIGEY | 1198..1287 | CDD:404722 | |||
| bdl | NP_608822.1 | IG_like | 42..128 | CDD:214653 | 12/66 (18%) |
| Ig | 43..131 | CDD:299845 | 12/69 (17%) | ||
| I-set | 153..242 | CDD:254352 | 22/93 (24%) | ||
| Ig | 157..242 | CDD:299845 | 22/89 (25%) | ||
| Ig_2 | 252..337 | CDD:290606 | 25/96 (26%) | ||
| IG_like | 260..327 | CDD:214653 | 23/70 (33%) | ||
| I-set | 341..428 | CDD:254352 | 25/87 (29%) | ||
| IGc2 | 356..419 | CDD:197706 | 20/63 (32%) | ||
| FN3 | 435..524 | CDD:238020 | 21/94 (22%) | ||
| FN3 | 554..636 | CDD:238020 | 23/100 (23%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||