Sequence 1: | XP_017449758.1 | Gene: | Nrcam / 497815 | RGDID: | 3209 | Length: | 1315 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245581.1 | Gene: | Nrg / 31792 | FlyBaseID: | FBgn0264975 | Length: | 1309 | Species: | Drosophila melanogaster |
Alignment Length: | 1344 | Identity: | 411/1344 - (30%) |
---|---|---|---|
Similarity: | 624/1344 - (46%) | Gaps: | 159/1344 - (11%) |
- Green bases have known domain annotations that are detailed below.
Rat 48 QPPTITQQ-SPKDYIIDPREN-------IVIQCEAKGKPPPSFSWTRNGTHFDIDK-DPLVTMKP 103
Rat 104 GSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLV 168
Rat 169 LPCRPPIGLPPAIIFWM-----DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTRED--YICYARF 226
Rat 227 NHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKER-PPTFLTPEGNESHKEELRGN 290
Rat 291 VLSLECIAEGLPTPVIYWIKEDGTLP-VNRTFYRNFKKTLQIIHVSEADSGNYQCIAKNALG-AV 353
Rat 354 HHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKIDG 418
Rat 419 DTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFF 483
Rat 484 GSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKD 548
Rat 549 PTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPND--ERFSVDKDH-LVVSDV 610
Rat 611 KDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGD 675
Rat 676 DNNSPITKFIIEYEDAMHEAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEAS 740
Rat 741 EQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEW--TSVV 803
Rat 804 VANVSKYIVSGTPTFVPYLIKVQALNDVGFAPEPA-AVMGHSGEDLPMVAPGNVRV-SVVNSTLA 866
Rat 867 EAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLN 931
Rat 932 VRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYILKYQPI 996
Rat 997 NSTH-----ELGP-LVDLKIPANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEAITTVDEG 1055
Rat 1056 KKAGI--------LPPDVGAGKVRAVSPRIGNVTAAAAETYANISW--EYEGPEHVKFYVEYGVA 1110
Rat 1111 GSKEEWRKEIVNGSRSFFGLKGLMPGTAYKVR-VGAEGDSGFVSSEDVFET----GPAMASRQVD 1170
Rat 1171 IATQGWFIGLMCAVALLILILLIVCFIRRNKGGKYPVKEKEDAHADPEIQPMKEDDGTFGEYRSF 1235
Rat 1236 ESDAEDHKPLKKGSRTPSDRTVKKEDSDDSLVDYGEG-----------------------VNGQF 1277
Rat 1278 NEDGSFIGQYSGKKEKEPAEGNES--------SEAPSPVNAMNS 1313 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nrcam | XP_017449758.1 | IgI_NrCAM | 50..144 | CDD:409458 | 38/102 (37%) |
Ig strand B | 68..72 | CDD:409458 | 1/3 (33%) | ||
Ig strand C | 81..85 | CDD:409458 | 1/3 (33%) | ||
Ig strand E | 106..110 | CDD:409458 | 3/3 (100%) | ||
Ig strand F | 124..129 | CDD:409458 | 3/4 (75%) | ||
Ig strand G | 138..141 | CDD:409458 | 2/2 (100%) | ||
Ig | 153..242 | CDD:416386 | 27/95 (28%) | ||
Ig strand A | 153..156 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 158..162 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 165..173 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 180..186 | CDD:409353 | 2/10 (20%) | ||
Ig strand C' | 189..192 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 198..202 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 204..208 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 219..227 | CDD:409353 | 4/9 (44%) | ||
Ig strand G | 230..242 | CDD:409353 | 1/11 (9%) | ||
Ig | 281..362 | CDD:416386 | 24/82 (29%) | ||
Ig strand B | 292..296 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 305..309 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 327..331 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 341..346 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 354..357 | CDD:409353 | 0/2 (0%) | ||
Ig | 366..454 | CDD:416386 | 29/87 (33%) | ||
Ig strand B | 382..386 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 395..399 | CDD:409353 | 2/3 (67%) | ||
Ig strand E | 419..423 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 433..438 | CDD:409353 | 2/4 (50%) | ||
Ig strand G | 446..449 | CDD:409353 | 0/2 (0%) | ||
Ig | 460..546 | CDD:416386 | 25/85 (29%) | ||
Ig strand A | 460..463 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 467..470 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 476..483 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 489..494 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 496..498 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 505..509 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 512..517 | CDD:409353 | 3/4 (75%) | ||
Ig strand F | 525..533 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 536..546 | CDD:409353 | 2/9 (22%) | ||
Ig | 553..637 | CDD:416386 | 29/86 (34%) | ||
Ig strand A | 553..556 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 558..562 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 565..574 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 582..587 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 590..593 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 597..602 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 603..609 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 616..624 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 627..637 | CDD:409353 | 4/9 (44%) | ||
FN3 | 651..741 | CDD:238020 | 31/89 (35%) | ||
fn3 | 754..836 | CDD:394996 | 33/83 (40%) | ||
fn3 | 852..944 | CDD:394996 | 27/92 (29%) | ||
fn3 | 957..1041 | CDD:394996 | 22/89 (25%) | ||
fn3 | 1075..1143 | CDD:394996 | 15/70 (21%) | ||
Bravo_FIGEY | 1198..1287 | CDD:404722 | 25/111 (23%) | ||
Nrg | NP_001245581.1 | Ig | 55..128 | CDD:299845 | 33/76 (43%) |
IG_like | 57..127 | CDD:214653 | 33/73 (45%) | ||
Ig | 135..214 | CDD:299845 | 24/79 (30%) | ||
IG_like | 141..216 | CDD:214653 | 24/79 (30%) | ||
ig | 251..332 | CDD:278476 | 23/82 (28%) | ||
I-set | 339..427 | CDD:254352 | 29/87 (33%) | ||
Ig | 354..427 | CDD:299845 | 26/72 (36%) | ||
I-set | 432..517 | CDD:254352 | 26/87 (30%) | ||
Ig | 446..517 | CDD:299845 | 23/72 (32%) | ||
I-set | 522..611 | CDD:254352 | 30/88 (34%) | ||
ig | 525..609 | CDD:278476 | 28/83 (34%) | ||
FN3 | 613..707 | CDD:238020 | 34/94 (36%) | ||
FN3 | 716..807 | CDD:238020 | 35/90 (39%) | ||
fn3 | 817..905 | CDD:278470 | 27/93 (29%) | ||
FN3 | 917..1004 | CDD:238020 | 23/90 (26%) | ||
FN3 | 1041..1111 | CDD:238020 | 19/89 (21%) | ||
Bravo_FIGEY | 1155..>1221 | CDD:290593 | 23/74 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 69 | 1.000 | Domainoid score | I9401 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3513 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H21041 | |
Inparanoid | 1 | 1.050 | 496 | 1.000 | Inparanoid score | I1335 |
OMA | 1 | 1.010 | - | - | QHG47974 | |
OrthoDB | 1 | 1.010 | - | - | D208655at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000777 | |
OrthoInspector | 1 | 1.000 | - | - | otm45103 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101169 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X532 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.780 |