DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD6 and TOPP8

DIOPT Version :9

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001330891.1 Gene:TOPP8 / 832846 AraportID:AT5G27840 Length:330 Species:Arabidopsis thaliana


Alignment Length:288 Identity:171/288 - (59%)
Similarity:221/288 - (76%) Gaps:2/288 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LNDLLNKLMSFRRSKMQRLPLLESEVNLLCTLARELFLDEPMLLNVPAPIRVVGDIHGQFYDLLK 96
            |:|::.:|:..:..|  ::.|.|||:..||..||::||.:|.||::.||||:.||||||:.|||:
plant    14 LDDIIRRLLEGKGGK--QVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQYQDLLR 76

  Fly    97 ILDQCGYPPQTRYLFLGDYVDRGKNSVETITLLLALRVKFPKHIYLLRGNHESQSVNRVYGFFDE 161
            :.:..||||...||||||||||||.|:|||.||||.::::|..|||||||||...:||:|||:||
plant    77 LFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRGNHEDAKINRIYGFYDE 141

  Fly   162 CKRRYTVKLWKTFVDCYNCMPVAAIISHRIFCCHGGLSPQLKELSNIESIARPTEVPETGLLCDL 226
            ||||:.|:|||.|.||:||:||||:|..:|.|.||||||.|..|:.|..|.||.|:|::||||||
plant   142 CKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLDNLNQIREIQRPIEIPDSGLLCDL 206

  Fly   227 LWSDPDRYGFGWTSSDRGVSYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQLVTVFSA 291
            ||||||:...||..||||:|..:|.|.:.:||.|||.||:||.||||||||||||||:|||:|||
plant   207 LWSDPDQKIEGWADSDRGISCTFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSA 271

  Fly   292 PNYCGLYDNAGASMGVDKDLVISFDIQR 319
            |||.|.:|||||.:.||:.||.||:|.:
plant   272 PNYGGEFDNAGALLSVDESLVCSFEIMK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:301300 166/265 (63%)
PP2Ac 54..315 CDD:197547 163/260 (63%)
TOPP8NP_001330891.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D766640at2759
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11668
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.890

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