DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD6 and ppp4cb

DIOPT Version :9

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001104638.1 Gene:ppp4cb / 562705 ZFINID:ZDB-GENE-080219-32 Length:307 Species:Danio rerio


Alignment Length:288 Identity:132/288 - (45%)
Similarity:191/288 - (66%) Gaps:6/288 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NLNDLLNKLMSFRRSKMQRLPLLESEVNLLCTLARELFLDEPMLLNVPAPIRVVGDIHGQFYDLL 95
            :::||..::...||.::    :.|:||..||..|||:.::|..:..|.:|:.|.||||||||||.
Zfish     3 DMSDLDRQIDQLRRCEL----IKENEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLK 63

  Fly    96 KILDQCGYPPQTRYLFLGDYVDRGKNSVETITLLLALRVKFPKHIYLLRGNHESQSVNRVYGFFD 160
            ::....|..|:|.|||:||:||||..||||..|||||:|::|..|.|:||||||:.:.:||||:|
Zfish    64 ELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYD 128

  Fly   161 ECKRRY-TVKLWKTFVDCYNCMPVAAIISHRIFCCHGGLSPQLKELSNIESIARPTEVPETGLLC 224
            ||.|:| :|.:|:...:.::.:.::|||..:|||.||||||.::.|..|.:|.|..|||..|.:|
Zfish   129 ECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMC 193

  Fly   225 DLLWSDPDRYGFGWTSSDRGVSYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQLVTVF 289
            |||||||:. ..||..|.||..||:|.||:.:|...||.|::|||||:|.:||::.....::||:
Zfish   194 DLLWSDPED-TTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVW 257

  Fly   290 SAPNYCGLYDNAGASMGVDKDLVISFDI 317
            ||||||....|..|.:.:|:.|...|.|
Zfish   258 SAPNYCYRCGNVAAILELDEHLQKEFII 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:301300 127/266 (48%)
PP2Ac 54..315 CDD:197547 126/261 (48%)
ppp4cbNP_001104638.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 132/285 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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