DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD6 and Ppef2

DIOPT Version :10

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_038947795.1 Gene:Ppef2 / 305246 RGDID:1307093 Length:793 Species:Rattus norvegicus


Alignment Length:406 Identity:103/406 - (25%)
Similarity:156/406 - (38%) Gaps:144/406 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YRLPGALNLNDLLNKLMSFRRSKMQRLPLLESEVNLLCTLARELFLDEPMLLNVPAPIRVVGDIH 88
            :||...|:...:||.|...|| .:.:||    .:|.:.|...|             .:.|.||:|
  Rat   174 FRLRQQLHARYVLNLLYETRR-HLAQLP----NINRVSTCYSE-------------EVTVCGDLH 220

  Fly    89 GQFYDLLKILDQCGYP-PQTRYLFLGDYVDRGKNSVETITLLLALRVKFPKHIYLLRGNHESQSV 152
            ||..||:.|..:.|.| |:..|:|.||:|||||:|||.:.:|.|..:.:||..:|.|||||...|
  Rat   221 GQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHLNRGNHEDHLV 285

  Fly   153 NRVYGFFDECKRRYTV---KLWKTFVDCYNCMPVAAIISHRIFCCHGGLSPQL------------ 202
            |..|||..|...:|.:   |:.:|..|.:..:|:|.::..::...|||:|.:.            
  Rat   286 NLRYGFTKEVMHKYKIHGKKILRTLQDVFCWLPLATLVDEKVLVLHGGVSDKTDLELLAKLDRHK 350

  Fly   203 ----------KELSNIE----------SIARPT------------------------------EV 217
                      ||..|:|          |..:||                              .:
  Rat   351 IVSTMRCKTRKESENLEEQKRKDNQTSSAQKPTPWFLPQSRSLPSSPFHLGSGFKAYKACRSCSI 415

  Fly   218 P----------------------------ETGLL-------------C----------------- 224
            |                            :.|.|             |                 
  Rat   416 PCGSAVSKELSRQGQVRRSMDLELELCRQQAGFLGIREKRESLPLADCDADAGGMLKPTPEEWKQ 480

  Fly   225 --DLLWSDPDRYGFGWTSSDRGVSYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQLVT 287
              |:|||||........::.||....:|.||.|:.::|.....:.|:|:...:||||...|:::|
  Rat   481 VVDILWSDPMAQEGCKANTVRGGGCYFGPDVTEQLMEKYKLQFLIRSHECKPEGYEFCHNRKVLT 545

  Fly   288 VFSAPNYCGLYDNAGA 303
            :|||.||..:..|.||
  Rat   546 IFSASNYYEVGSNRGA 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:472684 94/379 (25%)
Ppef2XP_038947795.1 IQCD <60..81 CDD:467745
MPP_RdgC 161..577 CDD:277364 103/406 (25%)
FRQ1 617..762 CDD:444056
EFh 697..762 CDD:238008
Blue background indicates that the domain is not in the aligned region.

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