DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD6 and ppb1

DIOPT Version :10

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_596178.1 Gene:ppb1 / 2540024 PomBaseID:SPBP4H10.04 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:329 Identity:124/329 - (37%)
Similarity:186/329 - (56%) Gaps:25/329 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVDTLHSLHFAGQLSNSEANADYRLPGAL---NLNDLLNKLMSFRRSKMQRLPLLESEVNL-LCT 62
            :|.||..:     :.|.:|.|.| :|..:   ::|:.....:.|.|:...|...|..|..| :..
pombe    37 SVSTLDRV-----VKNVQAPATY-IPTDVEFFDINEPDKPDLHFLRNHFIREGRLSEEQTLYIIK 95

  Fly    63 LARELFLDEPMLLNVPAPIRVVGDIHGQFYDLLKILDQCGYPPQTRYLFLGDYVDRGKNSVETIT 127
            .|.|:...|..|:.|.||:.|.||||||:|||:|:.:..|.|..|:|||||||||||..|:|.:.
pombe    96 KATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYLFLGDYVDRGYFSIECLL 160

  Fly   128 LLLALRVKFPKHIYLLRGNHESQSVNRVYGFFDECKRRYTVKLWKTFVDCYNCMPVAAIISHRIF 192
            .|.||::.:||.::|||||||...:...:.|..||..:|.:|:::..:..:|.:|:|||::.:..
pombe   161 YLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKVYEACLQSFNALPLAAIMNKQFL 225

  Fly   193 CCHGGLSPQLKELSNIESIARPTEVPETGLLCDLLWSDPDRYGFGWTSSD--------RGVSYLY 249
            |.||||||:|..|::|..|.|..|.|..||:|||||||| ...||...|:        ||.||.|
pombe   226 CVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSDP-LEDFGSEKSNKHFIHNNVRGCSYFY 289

  Fly   250 GRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQ------LVTVFSAPNYCGLYDNAGASMGVD 308
            ....:..||:.|:...|.|||:..:.||..:.|.:      |:|:||||||..:|:|..|.:..:
pombe   290 SYQAVCTFLENNNLLSVIRAHEAQDVGYRMYRKTKTTGFPSLMTIFSAPNYLDVYNNKAAVLKYE 354

  Fly   309 KDLV 312
            .:::
pombe   355 NNVM 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:472684 112/277 (40%)
ppb1NP_596178.1 MPP_PP2B 70..374 CDD:277361 115/290 (40%)

Return to query results.
Submit another query.