DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD6 and Ppp2cb

DIOPT Version :9

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_058736.1 Gene:Ppp2cb / 24673 RGDID:3381 Length:309 Species:Rattus norvegicus


Alignment Length:265 Identity:129/265 - (48%)
Similarity:175/265 - (66%) Gaps:2/265 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LLESEVNLLCTLARELFLDEPMLLNVPAPIRVVGDIHGQFYDLLKILDQCGYPPQTRYLFLGDYV 116
            |.|::|..||..|:|:...|..:..|..|:.|.||:||||:||:::....|..|.|.|||:||||
  Rat    23 LNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYV 87

  Fly   117 DRGKNSVETITLLLALRVKFPKHIYLLRGNHESQSVNRVYGFFDECKRRY-TVKLWKTFVDCYNC 180
            |||..||||:|||:||:|::|:.|.:|||||||:.:.:||||:|||.|:| ...:||.|.|.::.
  Rat    88 DRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 152

  Fly   181 MPVAAIISHRIFCCHGGLSPQLKELSNIESIARPTEVPETGLLCDLLWSDPDRYGFGWTSSDRGV 245
            :|:.|::..:|||.||||||.:..|.:|.::.|..|||..|.:|||||||||..| ||..|.||.
  Rat   153 LPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRG-GWGISPRGA 216

  Fly   246 SYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQLVTVFSAPNYCGLYDNAGASMGVDKD 310
            .|.:|:|:.|.|...|...||.||||:|.:||.:...|.:||:|||||||....|..|.|.:|..
  Rat   217 GYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDT 281

  Fly   311 LVISF 315
            |..||
  Rat   282 LKYSF 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:301300 129/265 (49%)
PP2Ac 54..315 CDD:197547 126/261 (48%)
Ppp2cbNP_058736.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 129/265 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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