DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD6 and Ppef1

DIOPT Version :10

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_011246120.1 Gene:Ppef1 / 237178 MGIID:1097157 Length:676 Species:Mus musculus


Alignment Length:344 Identity:98/344 - (28%)
Similarity:157/344 - (45%) Gaps:57/344 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FAGQLSNSEANADYRLPGALNLNDLLNKLMSFRRSKMQRLPLLESEVNL-LCTLARELFLDEPML 74
            |.|.:...::....||...|...|:...|.:|::.:     :|.:...| :...||::....|..
Mouse   126 FLGLIEVPDSYDGPRLQFPLTFTDIHILLQAFKQQQ-----ILHAHYVLEVLFEARKVLKQMPNF 185

  Fly    75 LNV---PA-PIRVVGDIHGQFYDLLKILDQCGYPPQTR-YLFLGDYVDRGKNSVETITLLLALRV 134
            .:|   || .|.:.||:||:..||:.|..:.|.|.:.. |:|.||:||||.||:|.:.:||...:
Mouse   186 SHVKTFPAKEITICGDLHGKLDDLMLIFYKNGLPSENNPYVFNGDFVDRGNNSMEILMILLVCFL 250

  Fly   135 KFPKHIYLLRGNHESQSVNRVYGFFDECKRRYTV---KLWKTFVDCYNCMPVAAIISHRIFCCHG 196
            .:|..::|.|||||...:|..|||..|..::|.:   |:.:...:.|..:|:..||.:.|...||
Mouse   251 VYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGRKILQVLEEVYTWLPIGTIIDNEILVIHG 315

  Fly   197 GLSPQLKELSNIESIAR-----------------------------------PTEVPETGL---- 222
            |:| :..:|:.:..:.|                                   |.:.|...|    
Mouse   316 GIS-ESTDLNTLHQLQRNKMKSVLMPPVLGNQETGEKRNKSASNYVEPRKVEPDKTPSEDLTKQE 379

  Fly   223 ---LCDLLWSDPDRYGFGWTSSDRGVSYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQ 284
               :.|:|||||......:.::.||....:|.||..|.|.||...::.|:|:...||||.....:
Mouse   380 WEQIVDILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGK 444

  Fly   285 LVTVFSAPNYCGLYDNAGA 303
            ::|||||.||.....|.||
Mouse   445 VITVFSASNYYEEGSNRGA 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:472684 90/304 (30%)
Ppef1XP_011246120.1 MPP_RdgC 144..479 CDD:277364 94/326 (29%)
FRQ1 511..671 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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