DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD6 and R08A2.2

DIOPT Version :10

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_506632.2 Gene:R08A2.2 / 187692 WormBaseID:WBGene00011133 Length:371 Species:Caenorhabditis elegans


Alignment Length:284 Identity:108/284 - (38%)
Similarity:164/284 - (57%) Gaps:20/284 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ESEVNLLCTLARELFLDEPMLLNVPAPIRVVGDIHGQFYDLLKILDQCGYPPQTRYLFLGDYVDR 118
            ||.:|.|           |.:|.|..||.:|||||||...|::..|..||||:.::|||||||||
 Worm    49 ESTLNPL-----------PAMLQVEHPITIVGDIHGQLDALIRYFDAVGYPPKVKFLFLGDYVDR 102

  Fly   119 GKNSVETITLLLALRVKFPKHIYLLRGNHESQSVNRVYGFFDECKRRYTVKLWKTFVDCYNCMPV 183
            |..|.|...||...::::|..::|||||||...:||:|||::|..|:...::|:.:.:.:|.:|:
 Worm   103 GAKSFEVSLLLFCYKIRYPHSVHLLRGNHECMKMNRLYGFYEELARKRGGRMWRQYQNVFNELPL 167

  Fly   184 AAIISHRIFCCHGGLSPQLKELSNIESIARPTEVPET---GLLCDLLWSDP--DRYGFGWTSSDR 243
            .|.:..||.|.|||:|.......:.:::.:| ..|.|   ||..||:|:||  |:......:..|
 Worm   168 CARVGQRILCMHGGISQNCNSWESFKALKKP-NTPLTCDEGLQVDLMWADPTQDKCNTFAMNKQR 231

  Fly   244 GVSYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQLVTVFSAPNYCGLYDNAGASMGVD 308
            .:|.::|...|:.||:|....|:.|||:|.::|:.|...::.|||||||.|||...|.||.|.|.
 Worm   232 AISVVFGEKGLDVFLKKLGLSLIVRAHEVSQEGFNFLFNKKCVTVFSAPYYCGNDTNCGAIMHVS 296

  Fly   309 KDLVISFDIQRGDIRRIVVRNESV 332
            :...|||.:.|   .|::...|::
 Worm   297 ESYEISFTVLR---PRMIATPENI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:472684 105/267 (39%)
R08A2.2NP_506632.2 PP2Ac 36..308 CDD:197547 106/273 (39%)

Return to query results.
Submit another query.