DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD6 and F23B12.1

DIOPT Version :10

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_506574.3 Gene:F23B12.1 / 184887 WormBaseID:WBGene00009079 Length:329 Species:Caenorhabditis elegans


Alignment Length:302 Identity:145/302 - (48%)
Similarity:204/302 - (67%) Gaps:11/302 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NDL-LNKLMSFRRSKMQRLP----------LLESEVNLLCTLARELFLDEPMLLNVPAPIRVVGD 86
            ||: .||:.::..|.::||.          .:|:|:..||..|||.|....:.|::.||:::.||
 Worm    19 NDVQKNKVQNWLHSVIERLKWWSPGRCQQLFVENELIELCYRAREQFWKNKVKLDIEAPVKICGD 83

  Fly    87 IHGQFYDLLKILDQCGYPPQTRYLFLGDYVDRGKNSVETITLLLALRVKFPKHIYLLRGNHESQS 151
            |||||.||:.:.:..|:|.:.:|||||||||||..|:|.||||...::..|..::||||||||:.
 Worm    84 IHGQFEDLMALFELNGWPEEHKYLFLGDYVDRGPFSIEVITLLFTFQILMPDKVFLLRGNHESRP 148

  Fly   152 VNRVYGFFDECKRRYTVKLWKTFVDCYNCMPVAAIISHRIFCCHGGLSPQLKELSNIESIARPTE 216
            ||..|||:.|||:||:|.|:..|...:||||:.|::|.:|.|.|||:|..|.:|:.:|.|.||.:
 Worm   149 VNMQYGFYLECKKRYSVALYDAFQLAFNCMPLCAVVSKKIICMHGGISEDLIDLTQLEKIDRPFD 213

  Fly   217 VPETGLLCDLLWSDPDRYGFGWTSSDRGVSYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFA 281
            :|:.|::.||.|:|||...||:..|.||....:|.:.::||||.::.|||.||||||.|||||||
 Worm   214 IPDIGVISDLTWADPDEKVFGYADSPRGAGRSFGPNAVKKFLQMHNLDLVVRAHQVVMDGYEFFA 278

  Fly   282 KRQLVTVFSAPNYCGLYDNAGASMGVDKDLVISFDIQRGDIR 323
            .||||||||||:|||.:|||.|.|.||..|:.:|.|.|.|::
 Worm   279 DRQLVTVFSAPSYCGQFDNAAAVMNVDDKLLCTFTIFRPDLK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:472684 135/275 (49%)
F23B12.1NP_506574.3 PP2Ac 51..317 CDD:197547 136/265 (51%)

Return to query results.
Submit another query.