DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD6 and pph-5

DIOPT Version :9

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001367002.1 Gene:pph-5 / 180263 WormBaseID:WBGene00012665 Length:496 Species:Caenorhabditis elegans


Alignment Length:248 Identity:102/248 - (41%)
Similarity:146/248 - (58%) Gaps:13/248 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PMLLNVPAP----IRVVGDIHGQFYDLLKILDQCGYPPQTR-YLFLGDYVDRGKNSVETITLLLA 131
            |.::.:..|    ..:.||:|||||||..|.:..|||.:|. |||.||:||||..|||||..::.
 Worm   223 PTMVEITVPTGKKFTICGDVHGQFYDLCNIFEINGYPSETNPYLFNGDFVDRGSFSVETIFTMIG 287

  Fly   132 LRVKFPKHIYLLRGNHESQSVNRVYGFFDECKRRYTVKLWKTFVDCYNCMPVAAIISHRIFCCHG 196
            .::.:|.|.::.||||||..:|::|||..|.|.:||.::...|.:.:..:|:..:|:.:||.|||
 Worm   288 FKLLYPNHFFMSRGNHESDVMNKMYGFEGEVKAKYTQQMCDMFTETFCWLPLCHLINEKIFVCHG 352

  Fly   197 GLSPQLKE----LSNIESIARPTEVPETGLLCDLLWSDPDRYGFGWTSSDRGVSYLYGRDVLEKF 257
            ||   .||    |.:|....|..:.|:.|::||||||||.... |.:.|.|||...:|.||..|:
 Worm   353 GL---FKEDGVTLEDIRKTDRNRQPPDEGIMCDLLWSDPQPIN-GRSPSKRGVGCQFGPDVTSKW 413

  Fly   258 LQKNDFDLVCRAHQVVEDGYEFFAKRQLVTVFSAPNYCGLYDNAGASMGVDKD 310
            .:.|..:.|.|:|:|..:|||.....|..|||||||||...:|.||.:.:..|
 Worm   414 CETNGIEYVVRSHEVKPEGYEMHHNGQCFTVFSAPNYCDQMNNKGAFITITGD 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:301300 102/248 (41%)
PP2Ac 54..315 CDD:197547 102/248 (41%)
pph-5NP_001367002.1 PLN03088 29..>139 CDD:215568
TPR repeat 33..57 CDD:276809
TPR repeat 62..91 CDD:276809
TPR repeat 96..124 CDD:276809
MPP_PP5_C 176..490 CDD:277362 102/248 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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