DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD6 and pph-4.2

DIOPT Version :9

Sequence 1:NP_524947.1 Gene:PpD6 / 49780 FlyBaseID:FBgn0005779 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001022898.1 Gene:pph-4.2 / 176663 WormBaseID:WBGene00004086 Length:321 Species:Caenorhabditis elegans


Alignment Length:309 Identity:130/309 - (42%)
Similarity:193/309 - (62%) Gaps:15/309 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PGALNLNDLLNKLMSFRRSKMQRLPLLESEVNLLCTLARELFLDEPMLLNVPAPIRVVGDIHGQF 91
            |..|..|||..::....|.::    :.|::|..:|...||:.::|..:..:..|:.:.|||||||
 Worm     9 PDQLGPNDLDRQIEIAMRCEL----ICETQVKSICAKVREILIEEANVQVIDTPVTICGDIHGQF 69

  Fly    92 YDLLKILDQCGYPPQTRYLFLGDYVDRGKNSVETITLLLALRVKFPKHIYLLRGNHESQSVNRVY 156
            :||:::....|.||.|.|||||||||||.|||||..||:.|:.::|..|.|:||||||:.:.:||
 Worm    70 HDLMELFRVGGSPPNTNYLFLGDYVDRGYNSVETFILLMLLKCRYPDRITLIRGNHESRQITQVY 134

  Fly   157 GFFDECKRRY-TVKLWKTFVDCYNCMPVAAIISHRIFCCHGGLSPQLKELSNIESIARPTEVPET 220
            ||:|||.|:| :.::||...:.::.:.:||:|..::||.||||||.:..|..|..:.|..|||..
 Worm   135 GFYDECVRKYGSGQVWKHCTEIFDYLSLAAVIDGKLFCVHGGLSPSIATLDQIRVLDRKIEVPHE 199

  Fly   221 GLLCDLLWSDPDRYGFGWTSSDRGVSYLYGRDVLEKFLQKNDFDLVCRAHQVVEDGYEFFAKRQL 285
            |.:||||||||:....||..|.||..||:|.|..|.|.:.|||..:|||||:|.:||:...::::
 Worm   200 GPMCDLLWSDPEEGCSGWGISPRGAGYLFGGDAAELFCENNDFLRICRAHQLVMEGYKLHFRKRV 264

  Fly   286 VTVFSAPNYCGLYDNAGASMGVDKDLVIS---FDI-------QRGDIRR 324
            |||:||||||....|..|.|.|.::.:.|   |::       .||:.::
 Worm   265 VTVWSAPNYCYRCGNVAAIMEVTEENIDSDPVFEVFEAATVENRGEPKK 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD6NP_524947.1 MPP_superfamily 51..317 CDD:301300 122/269 (45%)
PP2Ac 54..315 CDD:197547 121/264 (46%)
pph-4.2NP_001022898.1 PTZ00239 16..321 CDD:173488 127/302 (42%)
MPP_PP2A_PP4_PP6 16..303 CDD:277360 125/290 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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