DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and PPT1

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_011639.3 Gene:PPT1 / 853023 SGDID:S000003355 Length:513 Species:Saccharomyces cerevisiae


Alignment Length:513 Identity:211/513 - (41%)
Similarity:300/513 - (58%) Gaps:46/513 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TKAELDFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYYANRSLAHLRQESFGFALQ 104
            |....|.|.|.:.||:||..:|.|.|.|||:.||:||:|....:||::||:.||.:.::|..||.
Yeast     3 TPTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLDSTQSIYFSNRAFAHFKVDNFQSALN 67

  Fly   105 DGVSAVKADPAYLKGYYRRAAAHMSLGKFKQALCDFEFVAKCRPNDKDAKLKFTECNKIVKMRAF 169
            |...|:|.||..:|.|:|||.:.|:|.:||:|..|...:.|.:|||..|......|::.::...|
Yeast    68 DCDEAIKLDPKNIKAYHRRALSCMALLEFKKARKDLNVLLKAKPNDPAATKALLTCDRFIREERF 132

  Fly   170 ERAIAVDKPEKTLS----------EMYSDMENITIEDDYKGPQLE-----DGKVTLK-------- 211
            .:||...:.|..:|          :..:|:.|      |:||:||     |.|...|        
Yeast   133 RKAIGGAENEAKISLCQTLNLSSFDANADLAN------YEGPKLEFEQLYDDKNAFKGAKIKNMS 191

  Fly   212 --FMKELM-EHYKAQKRLHRKFAYKILCEIDTYMRAQPSLVDI---TVPDEEKFTICGDIHGQFY 270
              |:.::: :.:...|.|.:|:...|:...||..|.:||:|::   :.|| .|.::|||.|||||
Yeast   192 QEFISKMVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPD-VKISVCGDTHGQFY 255

  Fly   271 DLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMY 335
            |::|:|...|....|:.||||||||||||:|.|.....:..|:|:||:|||.||||||.|||::|
Yeast   256 DVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIY 320

  Fly   336 GFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEE 400
            ||..|...||:..:.::|.|.|..|||...||...|||||||.|....||...:.|:|..|||.:
Yeast   321 GFEDECKYKYSQRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRD 385

  Fly   401 GLMCELLWSDPQQWMGLGQSKRGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCI 465
            |...||||:|||:..|:|.|:||:|..||||:|::|.::|.|..|.||||::..|.:....||.:
Yeast   386 GAFMELLWADPQEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLM 450

  Fly   466 TVFSAPNYCDTMGNMGAFITI--------TGNNLKPN--YKSFEAVPHPDVKPMAYAN 513
            ||||||||||:.||:|..|.:        .|.|...|  .::||||.|||:|||||:|
Yeast   451 TVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQNLIIETFEAVEHPDIKPMAYSN 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150 28/64 (44%)
TPR_1 49..81 CDD:278916 16/31 (52%)
TPR repeat 49..77 CDD:276809 14/27 (52%)
TPR repeat 82..112 CDD:276809 11/29 (38%)
MPP_PP5_C 198..513 CDD:277362 153/343 (45%)
PP2Ac 226..502 CDD:197547 134/288 (47%)
PPT1NP_011639.3 PLN03088 10..>130 CDD:215568 48/119 (40%)
TPR repeat 12..40 CDD:276809 14/27 (52%)
TPR repeat 45..75 CDD:276809 11/29 (38%)
TPR repeat 80..108 CDD:276809 11/27 (41%)
MPP_PP5_C 165..508 CDD:277362 153/343 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342069
Domainoid 1 1.000 212 1.000 Domainoid score I494
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4550
Inparanoid 1 1.050 378 1.000 Inparanoid score I344
Isobase 1 0.950 - 0 Normalized mean entropy S636
OMA 1 1.010 - - QHG54071
OrthoFinder 1 1.000 - - FOG0005066
OrthoInspector 1 1.000 - - oto100029
orthoMCL 1 0.900 - - OOG6_102598
Panther 1 1.100 - - LDO PTHR45668
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R977
SonicParanoid 1 1.000 - - X3586
TreeFam 1 0.960 - -
1615.740

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