DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and AT1G48120

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_175246.2 Gene:AT1G48120 / 841230 AraportID:AT1G48120 Length:1340 Species:Arabidopsis thaliana


Alignment Length:533 Identity:151/533 - (28%)
Similarity:220/533 - (41%) Gaps:141/533 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GFALQDGVSAVKADPAYLKGYYRRAAA----HMSLGKFKQALCDFEFVAKCR-PNDKDAKLKFTE 159
            |||.|..|..|.|       .:.|:.|    .:::|..:|.|.|  .|..|. ....:|.|....
plant   457 GFAFQVLVQRVAA-------IHARSRASLEEELTVGSARQTLQD--IVDMCAGALQLNAPLGSLS 512

  Fly   160 CNKIVKMRAFERAIAVDKPEKTL-------SEM----YSDMENITIEDDYKGPQLE--------- 204
            ...:.:....|..:.:.:|..|:       .||    .:|||   |:|......||         
plant   513 NGSVAQAPTPEPFLMLPQPTPTIIPQKPMGGEMVCLPLNDME---IDDGLAAEPLELMPPVQDIG 574

  Fly   205 -----------------DGKVTLKFMKELMEHYK-AQKRL-----HRKFAYKILCEIDTY----M 242
                             .||:|..::.|:|..:. :.|.|     .....:.:|.|:..:    :
plant   575 CEQSLSSVSQKPLFWPSGGKLTFSWVCEVMLVFDWSSKNLPPCEFSSVLPFNVLDELVLFASKIL 639

  Fly   243 RAQPSLVDITVPDEEK--FTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECI 305
            :.:|:.|.|   |.||  ..:.||:|||.:||:.:.:..|.|.....|:|||::||.|::.:|..
plant   640 KKEPNCVRI---DSEKAEVVVVGDLHGQLHDLLYLMQDAGFPDGDRFYVFNGNYVDIGAWGLETF 701

  Fly   306 FTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIF---TQVFNWLPLCHCIN 367
            ..|..:|:|.|...:|.||:|||.:...||||..||..||....|.::   .:.|..|||...|.
plant   702 LLLLSWKVLLPARVYLLRGSHESESCTSMYGFKNEVLTKYGDKGAAVYKKCLECFQLLPLASVIA 766

  Fly   368 QKILVMHGGLF-----------------------STEDVTLDHIRRIE---------------RN 394
            .|:...|||||                       .|::..||...|.|               |.
plant   767 GKVYTAHGGLFRDVSSFLSDKQERNRKRKRTQKKQTDNTVLDTEDRSESLPLGSLKDLSKVKRRV 831

  Fly   395 CQPPEEG---LMCELLWSDPQQWMGLGQSK-RGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDM- 454
            ..||.||   :..::|||||.:..||..:| ||:|:.:|||.|.||.:||||.:|||.....|. 
plant   832 IDPPTEGSNLIPGDILWSDPSKDTGLFLNKERGIGLLWGPDCTAKFLQDNNLKWIIRGKGAPDER 896

  Fly   455 -----------GYEVAHNGKCITVFSAPN---YCDT---MGNMGAFITI---TGNNLKPNYKSFE 499
                       ||...|.| .||:||||:   :.||   ..|..|:|.:   ....||  ::..|
plant   897 AKRDDLAPMNGGYAEDHEG-LITLFSAPDHPQFQDTEERHNNKAAYIILQIPECEELK--FQPLE 958

  Fly   500 AV-PHPDVKPMAY 511
            || |.|  |..||
plant   959 AVSPRP--KAEAY 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150 7/13 (54%)
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809 6/11 (55%)
MPP_PP5_C 198..513 CDD:277362 124/419 (30%)
PP2Ac 226..502 CDD:197547 111/353 (31%)
AT1G48120NP_175246.2 PMD 78..435 CDD:287502
MPP_PP7 589..971 CDD:163661 122/389 (31%)
PP2Ac 631..961 CDD:197547 107/335 (32%)
Ehrlichia_rpt 981..>1325 CDD:118064
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45668
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.870

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